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View Structure Prediction Details

Protein: YBC7_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBC7_SCHPO.

Description E-value Query
Range
Subject
Range
gi|2257561 - gi|2257561|dbj|BAA21453.1| pi071 [Schizosaccharomyces pombe]
275.0 [0..1] [237..1]
gi|85091684 - gi|85091684|ref|XP_959022.1| hypothetical protein NCU08994 [Neurospora crassa OR74A]
gi|28920418, gi|... - gi|32421885|ref|XP_331386.1| hypothetical protein [Neurospora crassa], gi|28920418|gb|EAA29786.1| co...
246.0 [0..77] [283..196]
gi|67539206, gi|... - gi|67539206|ref|XP_663377.1| hypothetical protein AN5773.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
243.0 [0..60] [254..115]
gi|62663393, gi|... - gi|62663393|ref|XP_214448.3| PREDICTED: hypothetical protein [Rattus norvegicus], gi|109505620|ref|X...
222.0 [0..68] [247..225]
gi|88185429, gi|... - gi|88185429|gb|EAQ92897.1| hypothetical protein CHGG_01132 [Chaetomium globosum CBS 148.51], gi|1161...
220.0 [0..62] [244..86]
gi|109069682 - gi|109069682|ref|XP_001092691.1| PREDICTED: hypothetical protein [Macaca mulatta]
219.0 [0..69] [247..155]
CCDC90A - coiled-coil domain containing 90A
218.0 [0..69] [247..151]
gi|39972883, gi|... - gi|39972883|ref|XP_367832.1| hypothetical protein MG07736.4 [Magnaporthe grisea 70-15], gb|EAA53459....
218.0 [0..60] [247..94]
gi|159124106 - gi|159124106|gb|EDP49224.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
gi|70991401, gi|... - gi|70991401|ref|XP_750549.1| conserved hypothetical protein [Aspergillus fumigatus Af293], gi|668481...
218.0 [0..60] [256..120]
gi|50731283 - gi|50731283|ref|XP_417216.1| PREDICTED: hypothetical protein [Gallus gallus]
216.0 [0..75] [252..64]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSLLRKAID VNRSRITLHG IKVHSINTFR LIPYSLSLTK QIRFYASEGT DAGEMEKGLS  60
   61 VVNANHENRP FRDL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGYHFNTFTF LKTLMDKGYT EKEAEGLLEV TNMFVTDMLR HSHLNYLSEA DFENCSYLFR  60
   61 TALSELRSEK INMRKDQISS LRSGLFSNQR EVESLEQLVH EQLNKLNTES KMEFENRKND 120
  121 TKNEVQQLSA RIVELHNLLA VSLGKLRAEN ERQKWDQIRK AAGVVMAFTG FLVLVIPFGL 180
  181 GVRSRKKEKQ DELDNLGSFN LDNKRDDYTD TNLSHM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.154902
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle