YRC Public Data Repository - Protein Structure Prediction

Protein:	GET3_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	329 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GET3_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|49328336, gi\|... - gi\|49476780\|ref\|YP_034635.1\| anion-transporting ATPase [Bacillus thuringiensis serovar konkukian str...	203.0	[0..18]	[328..1]
gi\|228860607, gi... - gi\|228899032\|ref\|ZP_04063305.1\| Anion-transporting ATPase [Bacillus thuringiensis IBL 4222], gi\|2288... gi\|75764117, gi\|... - gi\|75764117\|ref\|ZP_00743705.1\| Arsenical pump-driving ATPase [Bacillus thuringiensis serovar israele... gi\|218895423, gi... - gi\|218895423\|ref\|YP_002443834.1\| anion-transporting ATPase family protein [Bacillus cereus G9842], g...	202.0	[0..19]	[328..1]
gi\|47569567, gi\|... - gi\|47569567\|ref\|ZP_00240245.1\| arsA ATPase family protein [Bacillus cereus G9241], gi\|47553750\|gb\|EA...	202.0	[0..19]	[328..1]
gi\|42779427, gi\|... - gi\|42779427\|ref\|NP_976674.1\| arsenite-activated ATPase (arsA) [Bacillus cereus ATCC 10987], gi\|42735...	201.0	[0..19]	[328..1]
gi\|51978402, gi\|... - gi\|52144933\|ref\|YP_081897.1\| arsenite-transporting ATPase [Bacillus cereus E33L], gi\|51978402\|gb\|AAU...	201.0	[0..18]	[328..1]
gi\|89204785, gi\|... - gi\|89204785\|ref\|ZP_01183361.1\| Anion-transporting ATPase [Bacillus weihenstephanensis KBAB4], gi\|891...	201.0	[0..18]	[328..1]
gi\|77686242, gi\|... - gi\|77686242\|ref\|ZP_00801604.1\| Anion-transporting ATPase [Alkaliphilus metalliredigenes QYMF], gi\|77...	196.0	[0..19]	[324..1]
gi\|113473950, gi... - gi\|71677095\|ref\|ZP_00674834.1\| Anion-transporting ATPase [Trichodesmium erythraeum IMS101], gi\|71669...	196.0	[0..19]	[326..1]
gi\|68241265, gi\|... - gi\|68551768\|ref\|ZP_00591162.1\| Anion-transporting ATPase [Prosthecochloris aestuarii DSM 271], gi\|68...	195.0	[0..19]	[324..1]
gi\|46119552, gi\|... - gi\|67923126\|ref\|ZP_00516616.1\| Anion-transporting ATPase [Crocosphaera watsonii WH 8501], gi\|6785502...	195.0	[0..19]	[323..1]

Back

Predicted Domain #1

Region A:
Residues: [1-329]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFDPLPGTL ENLLEQTSLK WIFVGGKGGV GKTTTSCSLA IQMSKVRSSV LLISTDPAHN  60
   61 LSDAFGTKFG KDARKVPGFD NLSAMEIDPN LSIQEMTEQA DQQNPNNPLS GMMQDLAFTI 120
  121 PGIDEALAFA EILKQIKSME FDCVIFDTAP TGHTLRFLNF PTVLEKALGK LGGLSSRFGP 180
  181 MINQMGSIMG VNANEQDLFG KMESMRANIS EVNKQFKNPD LTTFVCVCIS EFLSLYETER 240
  241 MIQELTSYEI DTHNIVVNQL LLDPNTTCPQ CMARRKMQQK YLAQIEELYE DFHVVKVPQV 300
  301 PAEVRGTEAL KSFSEMLVKP YVYPTSGKE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	32.522879
Match:	1f48A
Description:	Arsenite-translocating ATPase ArsA
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits