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View Structure Prediction Details

Protein: EMC1_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 885 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EMC1_SCHPO.

Description E-value Query
Range
Subject
Range
KIAA0090 - KIAA0090
873.0 [0..9] [883..9]
gi|114554424 - gi|114554424|ref|XP_001162981.1| PREDICTED: similar to KIAA0090 [Pan troglodytes]
871.0 [0..9] [883..9]
EMC1_PONAB - ER membrane protein complex subunit 1 OS=Pongo abelii GN=EMC1 PE=2 SV=1
K0090_PONPY - Uncharacterized protein KIAA0090 homolog precursor - Pongo pygmaeus (Orangutan)
869.0 [0..9] [883..9]
gi|108998548 - gi|108998548|ref|XP_001091700.1| PREDICTED: similar to CG2943-PA isoform 2 [Macaca mulatta]
869.0 [0..9] [883..9]
gi|109475725, gi... - gi|157822661|ref|NP_001102160.1| hypothetical protein LOC362643 [Rattus norvegicus], gi|149024425|gb...
839.0 [0..14] [883..13]

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Predicted Domain #1
Region A:
Residues: [1-885]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRPLWPLFL TALFLNIYRA ASVLIDEAGK NDFEISLLGK VNDLVYDTKN EYLYAVSQKG  60
   61 LLAKLNASNG DVIWRQSIAP ETSQLNYNPV TNFIITVDKD YLYIWNSKNG ILDRKIELAD 120
  121 GKGKLFEVNK GFVYLNPHTR KFIELDLQAS FSISIERDLQ LDAISFLTYA EKNYVLFKRD 180
  181 GQFVLQALDH NYAVYGPETV LNVPENAQLL VTEKDVIIYS SNGVIYGIHV SMADISQLLI 240
  241 DEYKTFEWSS IPGKRHGYSI TVDSQSTPVT YLFVIIDSEF VLIDEYIHED TEALGYIHME 300
  301 DNQTFSRVFA VANQIKFAPA TVITIPNQLS RPVFRLFTFA EGEISAIVIL DDGTFFSFSN 360
  361 TELVWKREEA LAYAINPSIL PTTLLTSYQK SIQDEENSSV SFLNRWYRHF NQLIDFLKHP 420
  421 HGFTSSSVLD DAFTTKIIIP TSTGSIFCLS SDPKQVHRIL WRYDFNINPE SVESWLLDIS 480
  481 DEDPKFAFVH QWNDAFSFYI LNASDGSVIS QKSRDFKADE FYYVDNISKN LPNQIFAVKD 540
  541 YKVLPLTGDN SIFEKISQEA NSIFVYTSET KVEGFSISAD LTMDVQWSYN LAEGEIVIAS 600
  601 IRRNPHEIVA SFGRVLQNRE VMYKYLNPNL FALFSKCKND LVVYVMDSVT GSIVYQNKHQ 660
  661 GIILFDKVYG VFSENWLVYS YQSDVPNLST KIISVELFEG SHSNEKIDSN EIYSRHNDYR 720
  721 PYAFTKAYIF DREITTLGVT NTPQGITSRD VLLGLSSNQV AMIPQALLSP MRPVLRPNEK 780
  781 ANDASFIPYE PIIPLNDDMV LSYNKRVYGV SQITSGITNF ESTTLVLSTG LDVFFTRTAP 840
  841 SMPYDMLSSH FDKKQLMLTT FGILLAVLLT KPLVKKKQLN TKWYN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.2
Match: 1yiqA
Description: Molecular cloning and structural analysis of quinohemoprotein alcohol dehydrogenase ADHIIG from Pseudomonas putida HK5. Compariison to the other quinohemoprotein alcohol dehydrogenase ADHIIB found in the same microorganism.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle