YRC Public Data Repository - Protein Structure Prediction

Protein:	TVP15_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	132 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TVP15_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|67515787, gi\|... - gi\|67515787\|ref\|XP_657779.1\| hypothetical protein AN0175.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	204.0	[0..3]	[132..311]
gi\|28923566, gi\|... - gi\|32415910\|ref\|XP_328433.1\| predicted protein [Neurospora crassa], gi\|28923566\|gb\|EAA32741.1\| conse... gi\|85105499 - gi\|85105499\|ref\|XP_961977.1\| hypothetical protein NCU07727 [Neurospora crassa OR74A]	174.0	[0..1]	[132..1]
gi\|42550908, gi\|... - gi\|46121407\|ref\|XP_385258.1\| hypothetical protein FG05082.1 [Gibberella zeae PH-1], gi\|42550908\|gb\|E...	164.0	[0..1]	[132..3]
gi\|88180423, gi\|... - gi\|88180423\|gb\|EAQ87891.1\| hypothetical protein CHGG_04510 [Chaetomium globosum CBS 148.51], gi\|1161...	152.0	[0..1]	[132..1]
gi\|114190277, gi... - gi\|115401496\|ref\|XP_001216336.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	146.0	[0..1]	[132..1]
gi\|119407721, gi... - gi\|119479077\|ref\|XP_001259567.1\| COPI-coated vesicle protein, putative [Neosartorya fischeri NRRL 18... gi\|66851158, gi\|... - gi\|70997555\|ref\|XP_753522.1\| COPI-coated vesicle protein [Aspergillus fumigatus Af293], gi\|66851158\|... gi\|159126747 - gi\|159126747\|gb\|EDP51863.1\| COPI-coated vesicle protein, putative [Aspergillus fumigatus A1163]	145.0	[0..1]	[132..1]
gi\|119192530, gi... - gi\|90305657\|gb\|EAS35288.1\| hypothetical protein CIMG_00642 [Coccidioides immitis RS], gi\|119192530\|r...	141.0	[0..1]	[132..1]
gi\|39952571, gi\|... - gi\|39952571\|ref\|XP_363919.1\| hypothetical protein MG01845.4 [Magnaporthe grisea 70-15], gb\|EAA56194....	140.0	[0..18]	[132..1]
orf19.3076, orf1... - orf19.3076 CGDID:CAL0001485 Assembly 19, Contig19-10166 (6708, 6310) CDS, reverse complemented, tran... gi\|46437007, gi\|... - gi\|68481223\|ref\|XP_715386.1\| hypothetical protein CaO19.3076 [Candida albicans SC5314], gi\|68481082\|...	129.0	[0..2]	[120..4]
gi\|111057519 - gi\|111057519\|gb\|EAT78639.1\| hypothetical protein SNOG_14014 [Phaeosphaeria nodorum SN15]	121.0	[0..1]	[132..1]

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Predicted Domain #1

Region A:
Residues: [1-132]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKTKMFSAI NLGVGGIFVL SGFIKLFSFS FVNALLALFI IVFGLGTIGL EKEIPPIAIK  60
   61 YGSFMFSFLG RGFFYAFMGT LLFSYSGFTS FLGFLVLLAG IAYCGANYVA GLQDYAPRSM 120
  121 RDNDWDDNVD EV

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	68.259637
Match:	PF08507.1
Description:	No description for PF08507.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits