YRC Public Data Repository - Protein Structure Prediction

Protein:	YI75_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	204 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YI75_SCHPO.

Description	E-value	Query Range	Subject Range
SPBPB2B2.15, SPB... - conserved fungal protein, conserved fungal protein YHEF_SCHPO - VEL1-related protein BPB2B2.15/BC1348.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=...	386.0	[0..2]	[204..1]
VEL1 - Protein of unknown function; highly induced in zinc-depleted conditions and has increased expression... VEL1_YEAST - Protein VEL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VEL1 PE=1 SV=1	375.0	[0..1]	[204..1]

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Predicted Domain #1

Region A:
Residues: [1-204]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFKNLISLF FIGLATAIRF NLTDLECSRL RGPHCGTYLL KVVGTNATYV GEKSFIGLDA  60
   61 LTESKGEFFQ RMLEQEPRLI PRLFTIAEND TANFTPLTFT TYLKTCNPQS IENAMIPFVN 120
  121 TVTSEISFDA WAYTAQNSSR ITGLSNQLMN STLYNVQVAT CTPGFSALLL DSPTINVFNN 180
  181 EEGMPSWCQP IELIPVCPLD EGFN

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Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits