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View Structure Prediction Details

Protein: MEP33_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 292 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MEP33_SCHPO.

Description E-value Query
Range
Subject
Range
gi|1236259 - gi|1236259|dbj|BAA12184.1| unnamed protein product [Schizosaccharomyces pombe]
305.0 [0..1] [292..1]
ZC3HF_RAT - Zinc finger CCCH domain-containing protein 15 OS=Rattus norvegicus GN=Zc3h15 PE=1 SV=1
297.0 [0..1] [277..1]
ZC3HF_MOUSE - Zinc finger CCCH domain-containing protein 15 OS=Mus musculus GN=Zc3h15 PE=1 SV=2
297.0 [0..1] [277..1]
gi|6841256 - gi|6841256|gb|AAF28981.1|AF161421_1 HSPC303 [Homo sapiens]
295.0 [0..27] [277..58]
gi|114582083 - gi|114582083|ref|XP_001160801.1| PREDICTED: similar to LEREPO4 protein isoform 1 [Pan troglodytes]
294.0 [0..1] [277..1]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKKAAKGK GDPGKAAKKD PTKKAADATF GLKNKNRSTK VQAKIRQIEQ NAAASGSKDA  60
   61 KRQEALRKRR EEEKRAAEAA KAEVAALFNA IPKKQTPQNF LTRKEEVKES QKIDLYSDVR 120
  121 DQQTDLPLEK RPWINTDIVC KFFLEACETG KYGWLWQCPN GNMTCIYKHA LP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.43
Match: 2d9nA
Description: No description for 2d9nA was found.

Predicted Domain #2
Region A:
Residues: [173-292]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGYVLSRDKK KDDTKEEISL EAFIEIERHR LGPNLTPVTE ENFKKWSDGR RDRILKQAEE  60
   61 RRSNRAVGRS NLSGREYFES NKDKTHEVVG DEEDWDFSAL RRETEALAKA QDATAPIVSV 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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