YRC Public Data Repository - Protein Structure Prediction

Protein:	YF14_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	188 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YF14_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|40746493, gi\|... - gi\|67517079\|ref\|XP_658423.1\| hypothetical protein AN0819.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	212.0	[0..1]	[187..1]
gi\|114197816, gi... - gi\|115492657\|ref\|XP_001210956.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	212.0	[0..1]	[187..1]
gi\|46108032, gi\|... - gi\|46108032\|ref\|XP_381074.1\| hypothetical protein FG00898.1 [Gibberella zeae PH-1], gi\|42545030\|gb\|E...	211.0	[0..1]	[187..1]
gi\|39950363, gi\|... - gi\|39950363\|ref\|XP_363282.1\| hypothetical protein MG01208.4 [Magnaporthe grisea 70-15], gb\|EAA55557....	209.0	[0..1]	[187..1]
gi\|159131600 - gi\|159131600\|gb\|EDP56713.1\| BAP31 domain protein, putative [Aspergillus fumigatus A1163] gi\|66850482, gi\|... - gi\|70996184\|ref\|XP_752847.1\| BAP31 domain protein [Aspergillus fumigatus Af293], gi\|66850482\|gb\|EAL9...	207.0	[0..1]	[187..1]
gi\|169770419 - gi\|169770419\|ref\|XP_001819679.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|238487168, gi... - gi\|238487168\|ref\|XP_002374822.1\| BAP31 domain protein, putative [Aspergillus flavus NRRL3357], gi\|22... gi\|83767538 - gi\|83767538\|dbj\|BAE57677.1\| unnamed protein product [Aspergillus oryzae]	206.0	[0..1]	[187..1]
gi\|116182136, gi... - gi\|88185993\|gb\|EAQ93461.1\| hypothetical protein CHGG_01696 [Chaetomium globosum CBS 148.51], gi\|1161...	204.0	[0..1]	[187..1]
gi\|85116155 - gi\|85116155\|ref\|XP_965002.1\| hypothetical protein NCU02599 [Neurospora crassa OR74A] gi\|28926802, gi\|... - gi\|32422709\|ref\|XP_331798.1\| hypothetical protein [Neurospora crassa], gi\|28926802\|gb\|EAA35766.1\| co...	204.0	[0..1]	[187..1]
gi\|90302606, gi\|... - gi\|90302606\|gb\|EAS32237.1\| hypothetical protein CIMG_03261 [Coccidioides immitis RS], gi\|119186427\|r...	200.0	[0..1]	[187..1]
CE25462 - status:Confirmed UniProt:Q9N3B5 protein_id:AAF59580.1	186.0	[0..1]	[188..1]

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Predicted Domain #1

Region A:
Residues: [1-108]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIYYMIVFM LLMVEIVSFV ILSLPLPLKV RRAILNAISN SPFAGRVKHV LKITIICILI  60
   61 LFADSVRRVV RVTKEYDLAI AAPSTTESAR SGYKASQFYA QRNLYLCG

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	9.200659
Match:	PF05529.3
Description:	No description for PF05529.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [109-188]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SALFLSLVVN RYYLALEAMI AAQDKMQALQ TQVEASTNNA KAVEELETLR TKLETRDKEY  60
   61 ETLAEKYAAV TKTVEKKKDI

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	0.983
Match:	2jd3A
Description:	No description for 2jd3A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits