YRC Public Data Repository - Protein Structure Prediction

Protein:	MRP10_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	88 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRP10_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|46137995, gi\|... - gi\|46137995\|ref\|XP_390688.1\| hypothetical protein FG10512.1 [Gibberella zeae PH-1], gi\|42546941\|gb\|E...	125.0	[0..7]	[88..6]
gi\|145015522, gi... - gi\|39963052\|ref\|XP_364853.1\| hypothetical protein MGG_09698 [Magnaporthe grisea 70-15], gb\|EAA49707....	121.0	[0..5]	[88..4]
gi\|32410881, gi\|... - gi\|32410881\|ref\|XP_325921.1\| predicted protein [Neurospora crassa], gi\|28921284\|gb\|EAA30593.1\| hypot... gi\|85094131 - gi\|85094131\|ref\|XP_959829.1\| hypothetical protein NCU06066 [Neurospora crassa OR74A]	120.0	[0..7]	[88..4]
MRP10 - Mitochondrial ribosomal protein of the small subunit; contains twin cysteine-x9-cysteine motifs gi\|190405056 - gi\|190405056\|gb\|EDV08323.1\| mitochondrial ribosome 37 S subunit component [Saccharomyces cerevisiae ... MRP10_YEAST - 37S ribosomal protein MRP10, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ...	112.0	[0..7]	[88..4]
gi\|88176271, gi\|... - gi\|88176271\|gb\|EAQ83739.1\| hypothetical protein CHGG_10143 [Chaetomium globosum CBS 148.51], gi\|1162...	111.0	[0..6]	[88..4]
gi\|50309091, gi\|... - gi\|50309091\|ref\|XP_454551.1\| unnamed protein product [Kluyveromyces lactis], gi\|49643686\|emb\|CAG9963... gi\|49643686 - gi\|49643686\|emb\|CAG99638.1\| KLLA0E13355p [Kluyveromyces lactis]	107.0	[0..10]	[88..9]
MRP10_ASHGO - 37S ribosomal protein MRP10, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC... MRP10_ASHGO - 40S ribosomal protein MRP10, mitochondrial OS=Ashbya gossypii GN=MRP10 PE=3 SV=1	106.0	[0..10]	[88..9]
gi\|115390895, gi... - gi\|115390895\|ref\|XP_001212952.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	101.0	[0..7]	[85..11]
gi\|111065088, gi... - gi\|169606658\|ref\|XP_001796749.1\| hypothetical protein SNOG_06377 [Phaeosphaeria nodorum SN15], gi\|11...	100.0	[0..11]	[88..18]
gi\|159130665 - gi\|159130665\|gb\|EDP55778.1\| 37S ribosomal protein Mrp10, mitochondrial [Aspergillus fumigatus A1163] gi\|70990678, gi\|... - gi\|70990678\|ref\|XP_750188.1\| 37S ribosomal protein Mrp10, mitochondrial [Aspergillus fumigatus Af293...	100.0	[0..7]	[85..11]

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Predicted Domain #1

Region A:
Residues: [1-88]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKIVNPPR LQGLSRLRVR PKREKNTIPC GQEMAALLGC WQNHGGQTDT AQCANLVAAL  60
   61 ENCMKTTHRK TKSENTINYH LARLGKLL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits