YRC Public Data Repository - Protein Structure Prediction

Protein:	ART1B_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	442 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ART1B_SCHPO.

Description	E-value	Query Range	Subject Range
SPAC806.04c - DUF89 family protein YI94_SCHPO - UPF0364 protein C806.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC806.04c PE=2 ...	590.0	[0..3]	[441..1]
C6orf211 - chromosome 6 open reading frame 211	562.0	[0..6]	[438..1]
ARMT1_MOUSE - Protein-glutamate O-methyltransferase OS=Mus musculus GN=Armt1 PE=1 SV=1	559.0	[0..6]	[438..1]
gi\|55627584 - gi\|55627584\|ref\|XP_518812.1\| PREDICTED: hypothetical protein [Pan troglodytes]	558.0	[0..6]	[438..1]
gi\|73946140 - gi\|73946140\|ref\|XP_854799.1\| PREDICTED: similar to F31D4.2 [Canis familiaris]	555.0	[0..10]	[438..5]
gi\|32416084, gi\|... - gi\|32416084\|ref\|XP_328520.1\| hypothetical protein [Neurospora crassa], gi\|28919176\|gb\|EAA28668.1\| hy... gi\|85089202 - gi\|85089202\|ref\|XP_957904.1\| hypothetical protein NCU07814 [Neurospora crassa OR74A]	553.0	[0..7]	[438..4]
ARMT1_MACFA - Protein-glutamate O-methyltransferase OS=Macaca fascicularis GN=ARMT1 PE=2 SV=2	552.0	[0..6]	[438..1]
gi\|109072328 - gi\|109072328\|ref\|XP_001097936.1\| PREDICTED: similar to F31D4.2 isoform 2 [Macaca mulatta]	552.0	[0..6]	[438..1]
gi\|42546739, gi\|... - gi\|46110357\|ref\|XP_382236.1\| hypothetical protein FG02060.1 [Gibberella zeae PH-1], gi\|42546739\|gb\|E...	543.0	[0..6]	[436..3]

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Predicted Domain #1

Region A:
Residues: [1-442]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLKLLHPPK PYAMTSDPES YASVCVMKKW PIIATNVIDE VSRNISKALE AGMSDKAAYV  60
   61 TQGKEIISLL NQLKYDLQHN RPLKPLVGQG PDIDDYNEEL EQVGPLTWGD APWLYAGCYF 120
  121 YRIMSLFFQA RSEWNRHDPF FEQKDFTLRS SKSAIEEFAK RYVHLNSELA SIQENKDDKA 180
  181 AYMIFVEMAE ISLWGNAIDL GLLVNATYEQ LQSLQGQKAV EESQKNILVN DFPKIWSKLS 240
  241 KVRHGRIDFV LDNAGFELFV DLLFATYLLK TEIAETIILH PKDVPWFVSD VLVNDIPHLF 300
  301 NSLTSYFSGE GVQKLASDLA EFHAEGKIVI RPNPFWTTAH YFGRLPDVAP KLLSDLEQSD 360
  361 MVIFKGDLNF RKLTGDCEWP HTTPFAEALG PIAGKFNILA LRTIKADVVV GLGKGVYEEI 420
  421 AKDNPHWERT GKYAVVEFCP KD

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	4.57
Match:	1xfiA
Description:	X-ray structure of gene product from Arabidopsis thaliana At2g17340
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits