YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YBB9_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBB9_SCHPO.

Description E-value Query
Range
Subject
Range
BYSL - bystin-like
575.0 [0..1] [448..1]
gi|109071144 - gi|109071144|ref|XP_001085599.1| PREDICTED: similar to bystin [Macaca mulatta]
570.0 [0..1] [448..1]
gi|73972909 - gi|73972909|ref|XP_532135.2| PREDICTED: similar to bystin [Canis familiaris]
570.0 [0..2] [448..138]
BYST_BOVIN - Bystin OS=Bos taurus GN=BYSL PE=2 SV=1
560.0 [0..1] [448..1]
BYST_MOUSE - Bystin OS=Mus musculus GN=Bysl PE=1 SV=3
544.0 [0..1] [448..1]
gi|94732902 - gi|94732902|emb|CAK03595.1| novel protein similar to bystin-like protein (zgc:63889) [Danio rerio]
536.0 [0..1] [443..44]

Back

Predicted Domain #1
Region A:
Residues: [1-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKAPKTKLH HAPLYKDIAE SSESGVLRQK PSKQKKSKES NTGNGFLDAK TSKKILQLAR  60
   61 EQKEELDEEE NGKPSQISAF ISNGHQKDTL ENPAIESSYE ESEHARNVSD SESITSQEEE 120
  121 EYEELEIDDA DRDLFDRFLP TVSGEEGDLT EEKTTSLSDL IMQKINEAEA RARGEYIPSA 180
  181 EEEEN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [186-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALPPLPPKVI EVYSKVGVLL SKYRSGKIPK AFKIIPTLSN WEDILYLTRP DMWTPHACYE  60
   61 ATRIFISNLK PVQAQHFLTV IILERVRDDI RENKKLNYHL YMALKKALYK PSSWFKGFLF 120
  121 PLVQENCTLR EAAIIGSILQ KVSVPVLHSA AALLRLTEFD LSGATSVFIR ILLDKKYALP 180
  181 YKVLDSLVFY FMRWKSLERP LAVLEHQSML VFAQRYKFDI TPEQKDALLE VVRLKGHYSI 240
  241 GPEIRRELLN SASRGEEIPV EMEY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.12
Match: 2ilrA
Description: No description for 2ilrA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle