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View Structure Prediction Details

Protein: NNF1_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NNF1_SCHPO.

Description E-value Query
Range
Subject
Range
gi|109465058 - gi|109465058|ref|XP_001060090.1| PREDICTED: similar to polyamine-modulated factor 1 [Rattus norvegic...
172.0 [0..3] [143..30]
gi|119573370, gi... - gi|55957513|emb|CAI15537.1| polyamine-modulated factor 1 [Homo sapiens], gi|119573370|gb|EAW52985.1|...
167.0 [0..3] [143..33]
gi|26347129 - gi|26347129|dbj|BAC37213.1| unnamed protein product [Mus musculus]
164.0 [0..4] [143..31]
gi|114560244 - gi|114560244|ref|XP_513878.2| PREDICTED: similar to polyamine-modulated factor 1 [Pan troglodytes]
161.0 [0..3] [143..33]
gi|109072746 - gi|109072746|ref|XP_001105574.1| PREDICTED: similar to polyamine-modulated factor 1 isoform 2 [Macac...
157.0 [0..3] [143..33]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSRKEQLDA FLSRTLSETI AHIPLEKFAQ CFPSMKKGKV IAVIHQQLIE FFEKSCKQEY  60
   61 ANLIKERDLN KKLDMLDECI HDAEFRKLHG ESEVDISNKQ PQEILKAHLY SHKRELLDKL 120
  121 NQDLLDIDKE NEGLSTQIAA GRKSN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 46.958607
Match: PF03980.5
Description: No description for PF03980.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle