YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|90265233
Organism: Oryza sativa Indica Group
Length: 253 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|90265233.

Description E-value Query
Range
Subject
Range
gi|113565535, gi... - gi|115460728|ref|NP_001053964.1| Os04g0629000 [Oryza sativa (japonica cultivar-group)], gi|113565535...
314.0 [0..19] [252..42]

Back

Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGLAADQDT VSLVRRVSRA LNRRLTDLVG LLFHHKSAGS LGAVAGFAIA VVFAWKFLRS  60
   61 SPARPRRPPG PKRPLVGPAA PDSAARDAAE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PANPGKLTTR QIVVKRLGGC RKVTCQLLGV VFEEITPQEL QTHATVRPSV VELLLEIAKY  60
   61 CDLYLMETVL DDKSEENALL ALESAGLFKT GGLMKEKVLF CSSEVGRTSF VRQLEADFHI 120
  121 DTSLDIISQL SRFIRCQLFV SSIEGGQLAG NVFNSPSLEQ FFS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle