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View Structure Prediction Details

Protein: gi|123982766, gi...
Organism: synthetic construct
Length: 423 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123982766, gi....

Description E-value Query
Range
Subject
Range
gi|73968917 - gi|73968917|ref|XP_848798.1| PREDICTED: similar to tubulin tyrosine ligase-like family, member 1 iso...
0.0 [1..423] [1..423]
TTLL1_RAT - Probable tubulin polyglutamylase TTLL1 OS=Rattus norvegicus GN=Ttll1 PE=2 SV=1
0.0 [1..423] [1..423]
TTLL1_MOUSE - Probable tubulin polyglutamylase TTLL1 OS=Mus musculus GN=Ttll1 PE=1 SV=1
0.0 [1..423] [1..423]
TTLL1_BOVIN - Probable tubulin polyglutamylase TTLL1 OS=Bos taurus GN=TTLL1 PE=2 SV=1
0.0 [1..423] [1..423]
gi|114686766 - gi|114686766|ref|XP_001171605.1| PREDICTED: tubulin tyrosine ligase-like family, member 1 isoform 3 ...
0.0 [1..423] [1..416]

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Predicted Domain #1
Region A:
Residues: [1-66]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKVKWVTD IEKSVLINNF EKRGWVQVTE NEDWNFYWMS VQTIRNVFSV EAGYRLSDDQ  60
   61 IVNHFP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [67-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NHYELTRKDL MVKNIKRYRK ELEKEGSPLA EKDENGKYLY LDFVPVTYML PADYNLFVEE  60
   61 FRKSPSSTWI MKPCGKAQGK GIFLINKLSQ IKKWSRDSKT SSFVSQSNKE AYVISLYINN 120
  121 PLLIGGRKFD LRLYVLVSTY RPLRCYMYKL GFCRFCTVKY TPSTSELDNM FVHLTNVAIQ 180
  181 KHGEDYNHIH GGKWTVSNLR LYLESTRGKE VTSKLFDEIH WIIVQSLKAV APVMNNDKHC 240
  241 FECYGYDIII DDKLKPWLIE VNASPSLTSS TANDRILKYN LINDTLNIAV PNGEIPDCKW 300
  301 NKSPPKEVLG NYEILYDEEL AQGDGADREL RSRQGQSLGP RAGRSRDSGR AVLTTWK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.12
Match: 1z2nX
Description: Inositol 1,3,4-trisphosphate 5/6-kinase complexed Mg2+/ADP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle