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View Structure Prediction Details

Protein: gi|90399021, gi|...
Organism: Oryza sativa Indica Group
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|90399021, gi|....

Description E-value Query
Range
Subject
Range
gi|5777632 - gi|5777632|emb|CAB53493.1| CAA303720.1 protein [Oryza sativa]
208.0 [0..16] [412..1]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAGEVVQGL KPVAAMVVVQ VVFAGVNIFY KLAVVCDGMD MRVLVAYRYL FASAVLAPLA  60
   61 YFVERKNRTK MTWRVLMLSF VCGLSGGSLA QNLYISGMKL TSATFATAMT NLIPAVTFVL 120
  121 AVLCRYERLA IRTVAGQAKV AGTLLGVGGA MLLTLYKGAE LN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.23
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #2
Region A:
Residues: [163-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PWHTHLDLVA ALEARHPAAA AATGNNDRVI MGSMLVVGSC VFYAVWLILQ AKLSREYPFH  60
   61 YTSTALMCVM SGAQSAAFAL LVDREPARWR LGLDIRLLSV VYSGVLASGV MLVVLSWCVK 120
  121 RRGPLFASVF NPLMLVVVAV LGSLLLDEKM HVGTLLGAAL IVVGLYAVLW GKGRETALEA 180
  181 AKVGDDNDNH HIHVVVVVPP EQAQPQPHQQ AEADADATTT ACEQPSDSDR ANIASSLRHS 240
  241 HRYFHRSCGF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 2i68A
Description: No description for 2i68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle