| Protein: | gi|19113052 |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 815 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19113052.
| Description | E-value | Query Range |
Subject Range |
|
|
336.0 | [0..442] | [812..13] |
|
|
289.0 | [0..427] | [813..10] |
|
|
289.0 | [0..427] | [813..10] |
|
|
288.0 | [0..427] | [813..10] |
|
|
287.0 | [0..427] | [813..10] |
|
|
284.0 | [0..427] | [813..10] |
|
|
284.0 | [0..427] | [813..10] |
|
|
280.0 | [0..436] | [815..6] |
|
Region A: Residues: [1-73] |
1 11 21 31 41 51
| | | | | |
1 MITFLEVFVY FYFFPLLVFI TLQYPRWTFN KWKALLPVSA YISFYFIIIS SFSTHLNILY 60
61 FNLSKSMVSF AQV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [74-431] |
1 11 21 31 41 51
| | | | | |
1 PLEEYLNLLG HSLLTSIIYV MLKRRFYEQS VYNAKNGMLV YVNAIFAVVG IYCSVVHKSI 60
61 LQIGVTLTFI CPMLSFLLCF RIIISQKAAL VSIGISTLYY CFVQFMEVKS ALISYDRSLF 120
121 KFYPIDLFVL LLSQSFICII AFGVSDFINF QKEERNFRGK SNSAFYNDFI QSFKSEDLIQ 180
181 EYESSLLLEP SLRLRISYLA LFLKNTLQFG YIRKKENVNL NLVKTPKYDD LTKMNLSSST 240
241 ANTLIKGIQS YNFQNYEKAY SLLAAGVTNS LLEWTNTSVS DKEYLRIQCF IQSCLQYRLT 300
301 QDEKYLIDLD VKVCSLFNTS AREALIHYAK AMKLLSKYNS RENMITKLRE SSLYLLYA
|
| Detection Method: | |
| Confidence: | 1.05 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [432-663] |
1 11 21 31 41 51
| | | | | |
1 PTDAFLLLLL GLLMRLVLLN YGIWHDRRSA LKFTDIDYFV FSDASKYVSI GMSPYMRDTY 60
61 RYTPMLAILL LPTQYGFPSW GKYLFSISDL IAGWLMIKLL SRRISYKRSL IYSSFWILNP 120
121 FVAIISTRGN CEAILGILSI ALLYLIEKKS VWLASLILGF SVHFKIYPFM YGIAFLVYFS 180
181 KPKKGSTFME KFLSLLSINQ LKIVVGSLFM FTICNLLMYY LYGSPFLEHT YL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [664-815] |
1 11 21 31 41 51
| | | | | |
1 YHFGRTDHRH NFSLHHLNLY YESSFGAKAS SLFAFLPQLS LCMLIPLVFG KKNLPGTLFA 60
61 QTFAFVTFNK VCTSQYFMWY LVFLPLVLPN SKLLSKKGLI CLSLWIIGQL LWLISAYNLE 120
121 MLGKSVFIPL WLSGLLFFFF NVYELKIILD SL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
