YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|19114206
Organism:	Schizosaccharomyces pombe 972h-
Length:	578 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19114206.

Description	E-value	Query Range	Subject Range
gi\|38106697, gi\|... - gi\|39975951\|ref\|XP_369366.1\| hypothetical protein MGG_06098 [Magnaporthe grisea 70-15], gb\|EAA52970....	579.0	[0..11]	[576..70]
EXO84_GIBZE - Exocyst complex component EXO84 OS=Gibberella zeae GN=EXO84 PE=3 SV=1 EXO84_GIBZE - Exocyst complex component EXO84 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 3...	574.0	[0..11]	[573..71]
gi\|116195792, gi... - gi\|88180407\|gb\|EAQ87875.1\| hypothetical protein CHGG_04494 [Chaetomium globosum CBS 148.51], gi\|1161...	510.0	[0..11]	[571..68]
gi\|46100003, gi\|... - gi\|71020127\|ref\|XP_760294.1\| hypothetical protein UM04147.1 [Ustilago maydis 521], ref\|XP_401762.1\| ...	479.0	[0..3]	[572..124]
EXO84_EMENI - Exocyst complex component exo84 OS=Emericella nidulans GN=exo84 PE=3 SV=1 EXO84_EMENI - Exocyst complex component exo84 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / N...	462.0	[0..11]	[566..66]
EXO84_ASPFU - Exocyst complex component exo84 OS=Aspergillus fumigatus GN=exo84 PE=3 SV=1 EXO84_ASPFU - Exocyst complex component exo84 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /... gi\|159124590 - gi\|159124590\|gb\|EDP49708.1\| Exocyst complex component Exo84, putative [Aspergillus fumigatus A1163]	459.0	[0..11]	[573..66]
gi\|85104844 - gi\|85104844\|ref\|XP_961819.1\| hypothetical protein [Neurospora crassa OR74A] EXO84_NEUCR - Exocyst complex component EXO84 - Neurospora crassa	458.0	[0..11]	[542..72]
gi\|115397239, gi... - gi\|115397239\|ref\|XP_001214211.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	456.0	[0..11]	[576..68]
EXOC8_BOVIN - Exocyst complex component 8 OS=Bos taurus GN=EXOC8 PE=2 SV=1	443.0	[0..52]	[570..6]

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Predicted Domain #1

Region A:
Residues: [1-182]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDNPSSFED EFIVASESIP NESQRQSPTR LRVGTSKTDD IYRQKRQTKH IISQNEVFLQ  60
   61 PKFFDNQNFD AQSYLNDVLQ DLSEDEFVSL YNKLLRIHMG VRKNLEKNFY KNLNEYVFIS 120
  121 GEVESMTSDF KKFQSLLKTL ETDIEGLNLV DHTHDPSDES IKQTVQRLRS SIEGLDEAFW 180
  181 EA

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	0.995
Match:	1deqC
Description:	Fibrinogen
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [183-322]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQRQLICEQY NWMLINIDNQ RPKLLVNMLL FNDRLLVTTS HMKEVDFPAK QQVLYNWNLT  60
   61 EISISSIETY GPAGAEMLQK EKEVSLYKLS INHNNKTTLL AVHNSEERDY MVRQARHHQL 120
  121 QELENWSRKH DEDLEFSREL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	21.154902
Match:	1zc4B
Description:	Crystal structure of the Ral-binding domain of Exo84 in complex with the active RalA
Matching Structure (courtesy of the PDB):

Predicted Domain #3

Region A:
Residues: [323-578]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EYHTKSEQAD MCSYTSFQVL CKNLDTQDIL QAYAKQRNMV KEISMQFDHL DIQISLQEFT  60
   61 DAIRNLALIQ NKLERGNLNE LFAEFFADKL HNRKRKVTEI LLHQLGFKGI SLSHGKEIVR 120
  121 YLRSLGHEKE GQGVFMKSRT LLIKEKCLNV QLEKDTPNFI DACAFIVFRC LAQTTSSYLQ 180
  181 LFELKKLDPA YRNWIFQQIE ALVDLIENQY KHLAHDRSYT DAVSKIMTYN TELKEAKIDA 240
  241 MPILQRLFDV HSKDLK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	47.522879
Match:	2d2sA
Description:	Crystal Structure of the Exo84p C-terminal Domains
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits