YRC Public Data Repository - Protein Structure Prediction

Protein:	GPI7_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	758 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPI7_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|14029404 - gi\|14029404\|gb\|AAK52677.1\|AF321466_1 putative protein Gpi7p [Yarrowia lipolytica]	345.0	[0..2]	[757..5]
gi\|38099109, gi\|... - gi\|39953549\|ref\|XP_363994.1\| hypothetical protein MGG_08839 [Magnaporthe grisea 70-15], gb\|EAA46496....	345.0	[0..4]	[757..14]
GPI7_YARLI - GPI ethanolamine phosphate transferase 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=LAS21 P... GPI7_YARLI - GPI ethanolamine phosphate transferase 2 OS=Yarrowia lipolytica GN=LAS21 PE=3 SV=1	345.0	[0..2]	[757..5]
GPI7_CANAL - GPI ethanolamine phosphate transferase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=LAS2... GPI7_CANAL - GPI ethanolamine phosphate transferase 2 OS=Candida albicans GN=LAS21 PE=3 SV=2	340.0	[0..2]	[752..8]
CE35863 - Yeast YJ10 like status:Partially_confirmed UniProt:Q19870 protein_id:CAA92675.2	338.0	[0..4]	[749..12]
GPI7_ASHGO - GPI ethanolamine phosphate transferase 2 OS=Ashbya gossypii GN=LAS21 PE=3 SV=1 GPI7_ASHGO - GPI ethanolamine phosphate transferase 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9...	338.0	[0..1]	[755..1]
gi\|115398450, gi... - gi\|115398450\|ref\|XP_001214814.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	305.0	[0..2]	[757..7]
gi\|46111255, gi\|... - gi\|46111255\|ref\|XP_382685.1\| hypothetical protein FG02509.1 [Gibberella zeae PH-1], gi\|42545398\|gb\|E...	305.0	[0..84]	[757..3]
GPI7_ASPFU - GPI ethanolamine phosphate transferase 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS... GPI7_ASPFU - GPI ethanolamine phosphate transferase 2 OS=Aspergillus fumigatus GN=las21 PE=2 SV=1	301.0	[0..5]	[753..10]

Back

Predicted Domain #1

Region A:
Residues: [1-418]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFAFFGIFW LQIFGSILFL LGFFPHKNDS TGKAMSNQFS PPAVIDQVVF VMVDALRADF  60
   61 VFSKSHNMPF TQSLLYNSTH GIGFSAFARS PTVTMPRLKA LTTGTIPGFL DVLLNIAESD 120
  121 TGSSIEAQDS WVYQLNSFNK KIEFYGDDTW LKLFPSAFSK FEGTTSFFVS DYTEVDNNVT 180
  181 RNFDHALPSS LSHSWDALIL HYLGVDHIGH LYGPSSPLLN IKLLEIDTII SRIYKYLQEY 240
  241 DEKTNTHSLI VLCGDHGMNE VGNHGGSSSG ETTAALSLLF PSNELSHINK PILNMDDNPY 300
  301 SILERVEQVD VVPTICLLLG IPIPKGNMGK VLSPVTELWK DTKTAKMAAL SNLFQLSLLK 360
  361 NPSLTTSELS TQFQDSDLND IRLALENLQS QMVAQSSSYS LDRMLVAISI LGACSILS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	30.522879
Match:	2qzuA
Description:	No description for 2qzuA was found.

Predicted Domain #2

Region A:
Residues: [419-644]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LILFRNLYNY KELLAFAPFV VQNIIIVFSS SFIEEEHVIW YFAAVSLSLL QLLNPKTRLA  60
   61 GSLQLFCLSI IKRWNQTGQK YSDLRDIVDD FIAPSTFMKT ILCVTSAFMP AIRSPSPINF 120
  121 LSSMFIAFYK LMPIISKHLN ELPIIASFDY TFFVRIIWSL LLISFLSKPT FKQLRCQLSL 180
  181 FILLLTRLEN MGLYLLYDIW QRTMPEEGTL ASVMYYVAEQ VAFFSL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [645-758]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNSNSLATVD LSQAYTGLDS YNIFAVGILL FTSVFAGALW WCLHQPKRMM DRSVKTFWIM  60
   61 SSISLTFLCI SCFIMRHHLF VWSVFSPKLL YNASWASMYF LAKCLISTIM VRLR

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits