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View Structure Prediction Details

Protein: GPI10_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 506 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPI10_SCHPO.

Description E-value Query
Range
Subject
Range
gi|18417492, gi|... - gi|21464563|gb|AAM52236.1| AT5g14850/T9L3_150 [Arabidopsis thaliana], gi|18417492|ref|NP_568305.1| m...
400.0 [0..2] [503..38]
gi|109484925 - gi|109484925|ref|XP_001053705.1| PREDICTED: similar to phosphatidylinositol glycan, class B [Rattus ...
399.0 [0..4] [505..130]
PIGB_MOUSE - GPI mannosyltransferase 3 OS=Mus musculus GN=Pigb PE=2 SV=2
394.0 [0..4] [494..51]
gi|17389331 - gi|17389331|gb|AAH17711.1| Phosphatidylinositol glycan anchor biosynthesis, class B [Homo sapiens]
384.0 [0..3] [494..61]
PIGB_BOVIN - GPI mannosyltransferase 3 OS=Bos taurus GN=PIGB PE=2 SV=1
383.0 [0..3] [494..51]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIWFWLAIL VFRWWNALWV KTFFQPDEFY QSLEVAHHFI FRYGFLTWEW TSAIRSALHP  60
   61 LIFAALYRVL QVLKLDSSYF VFTNAPKLLQ GTFAAILDYG TYKFALVRYG SKTANWTLAC 120
  121 SLVSIMNAYV GVRTFSNSLE TTLTSIGFYY FSYYLKYE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [159-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSSPEQRKKA YSSLLGFISV AAFACFIRPT NILVWIFPLL FWNKNPQTPI KDLLSFSNVF  60
   61 NRFRFLYALG YGRLFGIFVL CVSLFLVN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [247-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IIADRILYGR FVFPIISFFQ FNVTSGLSSL YGLNAWHYYL SQALPLICGG FLPFVLLTMD  60
   61 LQTAGTILCV FFPYSLIGHK ELRFVYPISP ILLTLAGKFF SSFSSWK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [354-506]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RAARFFFLIG LGHALVITFL CRFHQFGVME VMPLIHSLAE KNQTGLILAP CHTTPWQSHI  60
   61 HSPFAENGWK FLTCEPFEKP FDETDRFYEN MPTFLDKIKE WPDYLIFFEE RFYSLYSYLD 120
  121 SRGLKYEEVQ RYYNSLIPES RERAGALLVY KKL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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