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View Structure Prediction Details

Protein: FITM1_MOUSE
Organism: Mus musculus
Length: 292 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FITM1_MOUSE.

Description E-value Query
Range
Subject
Range
gi|23272977 - gi|23272977|gb|AAH37188.1| 1110028A07Rik protein [Mus musculus]
348.0 [0..1] [292..10]
gi|109501671, gi... - gi|157822997|ref|NP_001099507.1| fat storage-inducing transmembrane protein 1 [Rattus norvegicus], g...
346.0 [0..1] [292..1]
gi|109083091 - gi|109083091|ref|XP_001111682.1| PREDICTED: similar to Cg10671 like [Macaca mulatta]
tr|M3W4B5|M3W4B5... - Fat storage inducing transmembrane protein 1 OS=Felis catus GN=FITM1 PE=4 SV=1
343.0 [0..1] [292..1]
gi|114652312 - gi|114652312|ref|XP_522807.2| PREDICTED: hypothetical protein [Pan troglodytes]
340.0 [0..1] [292..1]
FITM1 - fat storage-inducing transmembrane protein 1
327.0 [0..1] [292..1]
FITM1_BOVIN - Fat storage-inducing transmembrane protein 1 OS=Bos taurus GN=FITM1 PE=2 SV=1
325.0 [0..1] [292..1]
gi|73962648 - gi|73962648|ref|XP_850360.1| PREDICTED: similar to Cg10671 like [Canis familiaris]
319.0 [0..1] [292..1]
CG10671-PA - This gene is referred to in FlyBase by the symbol Dmel\CG10671 (CG10671, FBgn0035586). It is a prote...
303.0 [0..4] [288..32]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERGPTVGAG LGAGTRVRAL LGCLVKVLLW VASALLYFGS EQAARLLGSP CLRRLYHAWL  60
   61 AAVVIFGPLL QFHVNSRTIF ASHGNFFNIK FVNSAWGWTC TFLGGFVLLV VFLATRRVAV 120
  121 TARHLSRLVV GAAVWRGAGR AFLLIEDLTG SCFEPLPQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [159-292]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLLLHELPDR KSCLAAGHQW RGYTVSSHTF LLTFCCLLMA EEAAVFAKYL AHGLPAGAPL  60
   61 RLVFLLNVLL LGLWNFLLLC TVIYFHQYTH KVVGAAVGTF AWYLTYGSWY HQPWSPGIPG 120
  121 HGLFPRSRSM RKHN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle