YRC Public Data Repository - Protein Structure Prediction

Protein:	CLIC5_MOUSE
Organism:	Mus musculus
Length:	251 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLIC5_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|17385642 - gi\|17385642\|dbj\|BAB32446.2\| glutathione S-transferase [Matricaria chamomilla]	181.0	[0..23]	[248..5]
gi\|8393147, gi\|7... - ref\|NP_058625.1\| chloride intracellular channel 5 [Homo sapiens], gi\|7673566\|gb\|AAF66928.1\| CLIC5 [...	176.0	[0..1]	[251..1]
gi\|11385535 - gi\|11385535\|gb\|AAG34850.1\|AF244707_1 glutathione S-transferase GST 42 [Zea mays]	174.0	[0..7]	[250..1]
gi\|109071373 - gi\|109071373\|ref\|XP_001101601.1\| PREDICTED: chloride intracellular channel 5 isoform 3 [Macaca mulat...	174.0	[0..1]	[251..1]
gi\|7447302, gi\|2... - pir\|\|T06239 probable glutathione transferase (EC 2.5.1.18), 2,4-D inducible - soybean, gi\|2920666\|gb...	173.0	[0..9]	[248..1]
gi\|8052534 - gi\|8052534\|gb\|AAF71798.1\|AC013430_7 F3F9.11 [Arabidopsis thaliana]	172.0	[0..9]	[250..1]

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Predicted Domain #1

Region A:
Residues: [1-251]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDSATTNGD DRDPEIELFV KAGIDGESIG NCPFSQRLFM ILWLKGVVFN VTTVDLKRKP  60
   61 ADLHNLAPGT HPPFLTFNGD VKTDVNKIEE FLEETLTPEK YPKLAAKHRE SNTAGIDIFS 120
  121 KFSAYIKNTK QQNNAALERG LTKALRKLDD YLNSPLPEEI DTNTHGDEKG SQRKFLDGDE 180
  181 LTLADCNLLP KLHVVKIVAK KYRNYDIPAE MTGLWRYLKN AYARDEFTNT CAADSEIELA 240
  241 YADVARRLSR S

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.39794
Match:	2d2zA
Description:	No description for 2d2zA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits