YRC Public Data Repository - Protein Structure Prediction

Protein:	LEG10_MOUSE
Organism:	Mus musculus
Length:	68 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LEG10_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|130502092, gi... - gi\|5882169\|gb\|AAD55242.1\|AF091738_1 galectin-4 [Oryctolagus cuniculus], gi\|130502092\|ref\|NP_00107618...	100.0	[0..2]	[68..44]
gi\|62825869 - gi\|62825869\|gb\|AAH94008.1\| Lectin, galactose binding, soluble 4 [Mus musculus]	100.0	[0..3]	[68..45]
gi\|3299781, gi\|1... - gi\|3299781\|dbj\|BAA31542.1\| ecalectin [Homo sapiens], gi\|193785124\|dbj\|BAG54277.1\| unnamed protein pr...	99.0	[0..3]	[68..44]
gi\|114668568 - gi\|114668568\|ref\|XP_001148579.1\| PREDICTED: galectin 9 isoform 3 [Pan troglodytes]	98.0	[0..3]	[68..44]

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Predicted Domain #1

Region A:
Residues: [1-68]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPYLQVDFHT EMKEDSDIAF HSRVYFGHWV VMNSRVNGAW QYEVTCHNMP FQDGKPFNLS  60
   61 ISVPPDKY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	19.30103
Match:	1g86A
Description:	Charcot-Leyden crystal (CLC) protein
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits