YRC Public Data Repository - Protein Structure Prediction

Protein:	DNPEP_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	467 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNPEP_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|114583455 - gi\|114583455\|ref\|XP_001163232.1\| PREDICTED: hypothetical protein isoform 13 [Pan troglodytes]	510.0	[0..4]	[466..23]
DNPEP - aspartyl aminopeptidase	510.0	[0..4]	[466..13]
gi\|74005551 - gi\|74005551\|ref\|XP_536081.2\| PREDICTED: similar to Aspartyl aminopeptidase isoform 1 [Canis familiar...	507.0	[0..4]	[466..13]
DNPEP_PONAB - Aspartyl aminopeptidase OS=Pongo abelii GN=DNPEP PE=2 SV=1 DNPEP_PONPY - Aspartyl aminopeptidase - Pongo pygmaeus (Orangutan)	507.0	[0..4]	[466..9]
gi\|109101117 - gi\|109101117\|ref\|XP_001103498.1\| PREDICTED: aspartyl aminopeptidase isoform 7 [Macaca mulatta]	505.0	[0..4]	[466..31]

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Predicted Domain #1

Region A:
Residues: [1-467]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTATAKSCAL DFLDFVNASP TPYHAVQNLA EHYMSHGFQY LSEKSDWQSK IEPGNSYFVT  60
   61 RNKSSIIAFS IGKKWKPGNG FSIIATHTDS PTLRLKPKSQ KSAYGYLQVG VEKYGGGIWH 120
  121 TWFDRDLSLA GRVMVEEEDG RVIQYNVHID RPLLRIPTLA IHLDPSANSS FSFNMETEFV 180
  181 PLIGLENELA KEETSDNGDK YHHPVLLSLL ANEISKSLET TIDPSKIVDF ELILGDAEKA 240
  241 RLGGIHEEFV FSPRLDNLGM TFCASQALTK SLENNSLDNE SCVRVVPSFD HEEIGSVSAQ 300
  301 GAESTFLPAV LQRICELGKE SSLFSISMVK SFLVSADMAH AMHPNYSSRY ENSNTPFLNK 360
  361 GTVIKVNANQ RYTTNSAGIV LLKKVAQLAD VPIQSFVVRN DSPCGSTIGP KLAAMTGMRT 420
  421 LDLGNPMLSM HSCREMCGSK DFEYAVVLFS SFFQNFANLE EKIIIDE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	129.0
Match:	2ijzA
Description:	No description for 2ijzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits