YRC Public Data Repository - Protein Structure Prediction

Protein:	ALG14_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	210 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALG14_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|84374933, gi\|... - gi\|84394434\|ref\|ZP_00993150.1\| N-acetylglucosaminyl transferase [Vibrio splendidus 12B01], gi\|843749...	164.0	[0..31]	[207..1]
gi\|91187948, gi\|... - gi\|91228514\|ref\|ZP_01262436.1\| N-acetylglucosaminyl transferase [Vibrio alginolyticus 12G01], gi\|911...	164.0	[0..31]	[207..1]
gi\|37197539, gi\|... - gi\|37678798\|ref\|NP_933407.1\| N-acetylglucosaminyl transferase [Vibrio vulnificus YJ016], gi\|37197539...	164.0	[0..22]	[207..10]
ALG14_MOUSE - UDP-N-acetylglucosamine transferase subunit ALG14 homolog OS=Mus musculus GN=Alg14 PE=1 SV=1	163.0	[0..1]	[209..2]
MURG_VIBF1 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosam...	162.0	[0..30]	[207..2]
MURG_HAES1 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosam...	162.0	[0..31]	[207..1]
gi\|116183853, gi... - gi\|75854404\|ref\|ZP_00762099.1\| COG0707: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase ...	161.0	[0..31]	[207..1]
MURG_VIBPA - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosam... MURG_VIBPA - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosam... gi\|153839053, gi... - gi\|153839053\|ref\|ZP_01991720.1\| undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyl...	161.0	[0..31]	[207..1]
gi\|85833686, gi\|... - gi\|86148540\|ref\|ZP_01066827.1\| N-acetylglucosaminyl transferase [Vibrio sp. MED222], gi\|85833686\|gb\|...	161.0	[0..31]	[207..1]
MURG_HAEI8 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosam... gi\|46129007 - gi\|46129007\|ref\|ZP_00155600.2\| COG0707: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase ...	159.0	[0..31]	[207..1]

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Predicted Domain #1

Region A:
Residues: [1-210]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTYVLTAIA VLASLIILLV GRNAIKSSKK KPFQKHLLVF FGSGGHTGEM LNLLNALDDK  60
   61 LYSVRSYVAG SDDTMSVSKA SLLSNSLPSV KSKIFKVPRA RYVKQSWLTT PFTAFWSLLG 120
  121 SISVIFWNPF GIPDVILCNG PGTCVFICLL GYLAKFLGKN VKIVYVESFA RVKSLSLSGK 180
  181 ILMPFVDRFL VQWPDLATKY KRAEYIGIVA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	38.39794
Match:	1f0kA
Description:	Peptidoglycan biosynthesys glycosyltransferase MurG
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits