| Protein: | YKH3_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 1225 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKH3_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
806.0 | [0..1] | [1223..10] |
|
|
804.0 | [0..6] | [1186..18] |
|
|
802.0 | [0..2] | [1207..19] |
|
|
792.0 | [0..13] | [1185..52] |
|
|
770.0 | [0..6] | [1185..18] |
|
|
763.0 | [0..2] | [1183..12] |
|
|
754.0 | [0..6] | [1224..23] |
|
|
750.0 | [0..25] | [1197..39] |
|
|
746.0 | [0..2] | [1197..21] |
|
|
677.0 | [0..9] | [1185..50] |
|
Region A: Residues: [1-216] |
1 11 21 31 41 51
| | | | | |
1 MSSQAEPSKG ASNADPNEKV EKMHLPTDTA GGGVKVKVKE QEASPSDKNN LNPQSAGVSE 60
61 VQVQDDTGAR GSGARDLKVP KQMQAPKSSE EKSDVDGVPT RPVSERELRK RDAMQFIQRH 120
121 QKVRNILAQY CPWLTDERLQ LCIELKILFM QHFQDSRLVL YTAVMSFLFG YLRFGFLSLF 180
181 IIMAVCIQYY RICDRRVKVN FKDDYTRYLS TRKLEN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [217-316] |
1 11 21 31 41 51
| | | | | |
1 DSETVTWLNT FLQQFWYIFE PSLSERITEI TDQILSENVP SFIDSMALSE FTLGTKSPRM 60
61 GFIRSYPKTE EDTVMMDLRL AFSPNDISDL TGREIAACIK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [317-424] |
1 11 21 31 41 51
| | | | | |
1 PKIALDLKIG KSIASAKMPV LIEDLSFTGN LRVKVKLIDK YPYAKTVGLT FTEKPVFSYI 60
61 LKPLGGDKFG FDIGNIPGLT TFITEQIHNT LGPMMYSPNV YELDIESM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [425-554] |
1 11 21 31 41 51
| | | | | |
1 MGAAGLNTAL GAVEFKLRKG DGFKDGLGGA VDPYVVIKNS ADRVIGKSKV AHNTGSPVFN 60
61 ETFYSVLNSF SENLNLEVYD FNDIRSDKLL GSAVLPLATL EAMPVTNDAF VELTLKGKTV 120
121 GRLNYDMKFH
|
| Detection Method: | |
| Confidence: | 27.522879 |
| Match: | 2d8kA |
| Description: | No description for 2d8kA was found. |
|
Region A: Residues: [555-695] |
1 11 21 31 41 51
| | | | | |
1 AVVPDSGEEI TKVDGPGVLQ FTVHQCKELS NDPSKRPTAY AKLIINNKEV YTTRKIKKNN 60
61 NPSWEESFGT LLPEGKNATL GVQIFTEESE HPFGTANVSL QDLFAATKTG LLWFPLQHAP 120
121 SGRVRMSVMW KPAQLNNDSI S
|
| Detection Method: | |
| Confidence: | 5.7 |
| Match: | 2nsqA |
| Description: | No description for 2nsqA was found. |
|
Region A: Residues: [696-890] |
1 11 21 31 41 51
| | | | | |
1 SMALATPIGA IRIHLRSANN LHSKIPGKKC DSYARIMSHN TKQFRTVVIA SNVNPFWDEY 60
61 MYAPVITKHD IFFLQVMNYN SSGEDKLIGQ TPINISNFIN QGENGALMEY HDPRELTVPL 120
121 SSTRGIKGNA TITFKCDFFP SAVTTSLSPD VTPAPKASST VATDKVNIEV LPESQKTPTA 180
181 VDNTSTSRGS TSVKT
|
| Detection Method: | |
| Confidence: | 14.39794 |
| Match: | 1cjyA |
| Description: | Domain from cytosolic phospholipase A2; Cytosolic phospholipase A2 catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [891-1225] |
1 11 21 31 41 51
| | | | | |
1 SKPKKISELL MPSEAVNAAL DFESGFMGFD IISYKIAKPA QELAIFLDDL PHHIFLSSAL 60
61 NVTGGATLHE YGNTFIRQLE YSQCTFKLLD GDKEVGSKTM LSRDLISKGA TKPLEIAFPD 120
121 GASILVAFRL TPVPVKLEEV EMYENMGEMT VDVIKATDLP AADSNGKSDP FVVFELQGEE 180
181 VYRTKTHKRT LNPTFNESFE VELPCKQTCN FVANVFDWDF GNKDDHLGSC VIDCKLLQQQ 240
241 QQTNYEIPLD SKQGVLYLRI TLSPKWVLRS KRAGNSSLVE GILGQTASIV GMPLKGISTV 300
301 GNVAVDGVAS VANLTNKMRK GISRGFKGIH HEKAK
|
| Detection Method: | |
| Confidence: | 48.522879 |
| Match: | 1dqvA |
| Description: | Synaptogamin I |
Matching Structure (courtesy of the PDB): |
|
