YRC Public Data Repository - Protein Structure Prediction

Protein:	YGK3_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	257 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGK3_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|42551161, gi\|... - gi\|46121861\|ref\|XP_385484.1\| hypothetical protein FG05308.1 [Gibberella zeae PH-1], gi\|42551161\|gb\|E...	262.0	[0..2]	[255..9]
gi\|46098858, gi\|... - gi\|71017671\|ref\|XP_759066.1\| hypothetical protein UM02919.1 [Ustilago maydis 521], ref\|XP_400534.1\| ...	259.0	[0..5]	[255..488]
gi\|85105983 - gi\|85105983\|ref\|XP_962077.1\| hypothetical protein NCU05306 [Neurospora crassa OR74A] gi\|32408363, gi\|... - gi\|32408363\|ref\|XP_324663.1\| predicted protein [Neurospora crassa], gi\|28923671\|gb\|EAA32841.1\| predi...	230.0	[0..6]	[255..37]
gi\|38106683, gi\|... - gi\|39975977\|ref\|XP_369379.1\| hypothetical protein MGG_06085 [Magnaporthe grisea 70-15], gb\|EAA52957....	229.0	[0..2]	[243..11]
gi\|49084274, gi\|... - gi\|67515861\|ref\|XP_657816.1\| hypothetical protein AN0212.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	210.0	[0..3]	[238..6]
gi\|17133171, gi\|... - gi\|17231528\|ref\|NP_488076.1\| hypothetical protein alr4036 [Nostoc sp. PCC 7120], gi\|17133171\|dbj\|BAB... gi\|25532479 - pir\|\|AE2310 hypothetical protein alr4036 [imported] - Nostoc sp. (strain PCC 7120)	209.0	[0..1]	[256..1]
gi\|71669027, gi\|... - gi\|71677806\|ref\|ZP_00675540.1\| Pyridoxamine 5'-phosphate oxidase-related [Trichodesmium erythraeum I...	206.0	[0..2]	[256..11]
gi\|45508375, gi\|... - gi\|75907891\|ref\|YP_322187.1\| pyridoxamine 5'-phosphate oxidase-related, FMN-binding [Anabaena variab...	205.0	[0..1]	[256..1]
gi\|186468248, gi... - gi\|23127753\|ref\|ZP_00109616.1\| COG5135: Uncharacterized conserved protein [Nostoc punctiforme PCC 73...	204.0	[0..1]	[256..1]

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Predicted Domain #1

Region A:
Residues: [1-257]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAWKNELL KLLKENVDSS GVIHPEYFQL ATLPTGNEIY PRNRTVAIRG FVGTGWHKPR  60
   61 PDDVLATDLL VFSTDIASHK AAEIAEQQKN TFPSGPIPNA FEMCGWLPKT MQQIRISGQI 120
  121 WLYTPELADR NEFPADKLIQ DHLINSNGRI PEEWSWEEER RRIWELHSPE LRASFSTPPS 180
  181 YSKYQGDVKV SPLPSTLTGK EDPGVIEAWK TAWGRFSLVV CEANEVEFLN LTPPPGKRVL 240
  241 HNRDLNTKQW SSTRVNV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	53.0
Match:	2i51A
Description:	No description for 2i51A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits