YRC Public Data Repository - Protein Structure Prediction

Protein:	TX261_MOUSE
Organism:	Mus musculus
Length:	196 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TX261_MOUSE.

Description	E-value	Query Range	Subject Range
TEX261 - testis expressed 261 gi\|114578017 - gi\|114578017\|ref\|XP_001146153.1\| PREDICTED: testis expressed sequence 261 isoform 1 [Pan troglodytes...	245.0	[0..1]	[196..1]
TX261_PONAB - Protein TEX261 OS=Pongo abelii GN=TEX261 PE=2 SV=1 TX261_PONPY - Protein TEX261 - Pongo pygmaeus (Orangutan)	245.0	[0..1]	[196..1]
gi\|109103308 - gi\|109103308\|ref\|XP_001101384.1\| PREDICTED: similar to testis expressed sequence 261 [Macaca mulatta...	245.0	[0..1]	[196..1]
gi\|27371040, gi\|... - gi\|27371040\|gb\|AAH41231.1\| Tex261-prov protein [Xenopus laevis], gi\|148229399\|ref\|NP_001080112.1\| te...	240.0	[0..1]	[196..1]
gi\|66773092, gi\|... - gi\|66773092\|ref\|NP_001019597.1\| testis expressed sequence 261 [Danio rerio], gi\|63102366\|gb\|AAH95136...	240.0	[0..1]	[196..1]
gi\|73970281 - gi\|73970281\|ref\|XP_538545.2\| PREDICTED: similar to testis expressed gene 261 [Canis familiaris]	238.0	[0..24]	[196..32]
TX261_BOVIN - Protein TEX261 OS=Bos taurus GN=TEX261 PE=2 SV=1	226.0	[0..24]	[196..21]
gi\|21300870, gi\|... - gi\|31227219\|ref\|XP_317847.1\| AGAP011456-PA [Anopheles gambiae str. PEST], gi\|21300870\|gb\|EAA13015.1\|... AGAP011456-PA - \|protein_coding\|3L:24932464:24933241:1\|gene:AGAP011456	212.0	[0..1]	[194..1]
gi\|85115788 - gi\|85115788\|ref\|XP_964934.1\| hypothetical protein NCU00778 [Neurospora crassa OR74A] gi\|32408955, gi\|... - gi\|38636402\|emb\|CAE81939.1\| related to transmembrane protein Tex-261 [Neurospora crassa], gi\|3240895...	210.0	[0..1]	[153..1]
gi\|38104650, gi\|... - gi\|39948698\|ref\|XP_363122.1\| hypothetical protein MGG_08706 [Magnaporthe grisea 70-15], gb\|EAA51184....	210.0	[0..1]	[153..1]

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Predicted Domain #1

Region A:
Residues: [1-196]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFMYVLSWL SLFIQVAFIT LAVAAGLYYL AELIEEYTVA TSRIIKYMIW FSTAVLIGLY  60
   61 VFERFPTSMI GVGLFTNLVY FGLLQTFPFI MLTSPNFILS CGLVVVNHYL AFQFFAEEYY 120
  121 PFSEVLAYFT FCLWIIPFAF FVSLSAGENV LPSTMQPGDD VVSNYFTKGK RGKRLGILVV 180
  181 FSFIKEAILP SRQKIY

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	149.455932
Match:	PF04148.4
Description:	No description for PF04148.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits