| Protein: | gi|90399281, gi|... |
| Organism: | Oryza sativa Indica Group |
| Length: | 724 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|90399281, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
394.0 | [0..7] | [723..10] |
|
|
389.0 | [0..1] | [724..1] |
|
|
362.0 | [0..11] | [722..1] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MFDSAHKAQY IDGQREMFKR LDESSPRSSV PSEVGGRSTL KFSMPSFGYD SFNPVRSFLS 60
61 GVRKGSGRLK SLRQSLTSGA PKTA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [85-225] |
1 11 21 31 41 51
| | | | | |
1 FAEDLKSFKK TIFDPQEKFL FQMNWFCFLS CVFAVAVDPL FFFLPIIDGD DKSSCIGIDK 60
61 KLAVTSTIIR TILDLVYLIR VFLQFRTAYV APSSRVFGTG ELVIDPMRIA IRYLKSYFVM 120
121 DFFALLPLPQ IVVWRYLHTL D
|
| Detection Method: | |
| Confidence: | 1.56 |
| Match: | 2a0lA |
| Description: | Crystal structure of KvAP-33H1 Fv complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [226-435] |
1 11 21 31 41 51
| | | | | |
1 GPDVPSTKNA LVWVVLFQYI PRLLRIFPVT KDLKRTAGVF IETAWLGAAY YLLWFMLAGH 60
61 NVGTLWYFLT IEREDSCWRS NCHSNDGCNK SYLYCSDNHT GNYTSWLSKR TELLSACSTN 120
121 SFQFGIFEQA LVSGILRPGN FISKICYCFW WGLQNLSTLG QGLQTSIYPG EVLFSIAICV 180
181 IGLILFALLI GNMQTYLQSV AIRLEEMRVK
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [436-504] |
1 11 21 31 41 51
| | | | | |
1 KRDAEQWMHH RSLPPQIRER VRRYERYRWL ETRGVDEENL VQTLPKDLRR DIKRHLCLGL 60
61 VKRVPLFEN
|
| Detection Method: | |
| Confidence: | 2.34 |
| Match: | 2ptmA |
| Description: | No description for 2ptmA was found. |
|
Region A: Residues: [505-652] |
1 11 21 31 41 51
| | | | | |
1 MDERLLDAIC ERLRPTLYTE NEYILREGDP VDEMHFILHG CLESETTDGG RSGFFNKVQL 60
61 KEGAFCGDEL LTWALDPKSA ANFPASTRTV KALTEVEAFA LCAEELKFVA SQFRRLHSRQ 120
121 VQHTFRFYSQ HWRTWAACFI QAAWRRYY
|
| Detection Method: | |
| Confidence: | 17.30103 |
| Match: | 1wgpA |
| Description: | Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [653-724] |
1 11 21 31 41 51
| | | | | |
1 KRKMAEQHRK EEEAANRQSS SSHHPSLAAT IYASRFAANA LRGVHRLRSR ASPTIVRLPK 60
61 PPEPDFAVDE AD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
