YRC Public Data Repository - Protein Structure Prediction

Protein:	DUS18_MOUSE
Organism:	Mus musculus
Length:	188 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DUS18_MOUSE.

Description	E-value	Query Range	Subject Range
DUS18_RAT - Dual specificity protein phosphatase 18 OS=Rattus norvegicus GN=Dusp18 PE=2 SV=1	176.0	[0..1]	[188..1]
DUS18_PONAB - Dual specificity protein phosphatase 18 OS=Pongo abelii GN=DUSP18 PE=2 SV=1 DUS18_PONPY - Dual specificity protein phosphatase 18 - Pongo pygmaeus (Orangutan)	172.0	[0..1]	[188..1]
gi\|114685900, gi... - gi\|55660994\|ref\|XP_515077.1\| PREDICTED: dual specificity phosphatase 18 isoform 3 [Pan troglodytes],... gi\|208966170, gi... - gi\|208966170\|dbj\|BAG73099.1\| dual specificity phosphatase 18 [synthetic construct], gi\|109451646\|emb... DUSP18 - dual specificity phosphatase 18 HGNC:18484\|MIM:6... - specificity phosphatase 18	171.0	[0..1]	[188..1]
CCDS13883.1_1 - null gi\|67971782 - gi\|67971782\|dbj\|BAE02233.1\| unnamed protein product [Macaca fascicularis] gi\|109093875 - gi\|109093875\|ref\|XP_001110413.1\| PREDICTED: dual specificity phosphatase 18 [Macaca mulatta]	170.0	[0..1]	[188..1]
gi\|57106012 - gi\|57106012\|ref\|XP_543483.1\| PREDICTED: similar to Dual specificity protein phosphatase 18 (Low mole...	167.0	[0..1]	[188..1]
gi\|86821461, gi\|... - gi\|86821461\|gb\|AAI05385.1\| Dual specificity phosphatase 1 [Bos taurus], gi\|114050891\|ref\|NP_00103991...	167.0	[0..2]	[178..156]

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Predicted Domain #1

Region A:
Residues: [1-188]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSPWSAFPV QIPQPSIRGL SQITKSLFIS NGVAANNKLL LSSNQITTVI NVSVEVANTF  60
   61 YEDIQYVQVP VVDAPVARLS NFFDSVADRI HSVEMQKGRT LLHCAAGVSR SAALCLAYLM 120
  121 KYHAMSLVDA HTWTKSCRPI IRPNSGFWEQ LIHYELQLFG KNTMQMMDSP MGRIPDIYEK 180
  181 ETRLMIPL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.0
Match:	2esbA
Description:	No description for 2esbA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits