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View Structure Prediction Details

Protein: gi|94995127, gi|...
Organism: Streptococcus pyogenes MGAS10750
Length: 105 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|94995127, gi|....

Description E-value Query
Range
Subject
Range
PTLA_LACLL - Lactose-specific phosphotransferase enzyme IIA component OS=Lactococcus lactis subsp. lactis GN=lacF...
gi|97953, gi|321... - pir||A23696 phosphotransferase system enzyme III (EC 2.7.-.-) - Lactococcus lactis, gi|3212515|pdb|...
137.0 [0..1] [105..1]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNREETTLLG FEIVAYAGDA RSKFLEALKA AQEGDYAKAE ELIAAGSDCL NDAHNAQTSL  60
   61 LQKEAAGDDL AYSVTLMHGQ DHLMTTILLQ DLMKHMIELY KRGAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.30103
Match: 1e2aA
Description: Enzyme IIa from lactose specific PTS, IIa-lac
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein-N(PI)-phosphohistidine-sugar phosphotransferase activity 5.00429001244066 bayes_pls_golite062009
carbohydrate transmembrane transporter activity 4.03872487639957 bayes_pls_golite062009
transporter activity 1.32957030120524 bayes_pls_golite062009
transmembrane transporter activity 1.20211801626802 bayes_pls_golite062009
active transmembrane transporter activity 1.08511657750399 bayes_pls_golite062009
substrate-specific transporter activity 0.93495816074069 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.81702015470704 bayes_pls_golite062009
binding 0.569728786489819 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.34582307123923 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.0202700968382801 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle