YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|107103336
Organism:	Pseudomonas aeruginosa PACS2
Length:	258 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|107103336.

Description	E-value	Query Range	Subject Range
gi\|46164502, gi\|... - gi\|46164502\|ref\|ZP_00205097.1\| COG1045: Serine acetyltransferase [Pseudomonas aeruginosa UCBPP-PA14]... gi\|218889900, gi... - gi\|218889900\|ref\|YP_002438764.1\| O-acetylserine synthase [Pseudomonas aeruginosa LESB58], gi\|2187701...	2.0E-68	[1..258]	[1..258]
gi\|254236720, gi... - gi\|84319380\|ref\|ZP_00967777.1\| COG1045: Serine acetyltransferase [Pseudomonas aeruginosa C3719], gi\|...	2.0E-68	[1..258]	[1..258]
gi\|152986827, gi... - gi\|94412418\|ref\|ZP_01292347.1\| hypothetical protein PaerP_01005783 [Pseudomonas aeruginosa PA7], gi\|...	4.0E-66	[1..257]	[1..257]
gi\|77460835, gi\|... - gi\|77460835\|ref\|YP_350342.1\| Serine O-acetyltransferase [Pseudomonas fluorescens Pf0-1], gi\|77384838...	2.0E-63	[1..253]	[1..253]
gi\|68346590, gi\|... - gi\|70732291\|ref\|YP_262047.1\| serine O-acetyltransferase [Pseudomonas fluorescens Pf-5], gi\|68346590\|...	7.0E-63	[1..253]	[1..253]
gi\|71733825, gi\|... - gi\|71733825\|ref\|YP_273565.1\| serine O-acetyltransferase [Pseudomonas syringae pv. phaseolicola 1448A...	1.0E-61	[1..252]	[1..252]
gi\|51102913 - gi\|51102913\|gb\|AAT96062.1\| CysE [Pseudomonas viridiflava]	2.0E-61	[1..252]	[1..252]
tr\|Q887A3\|Q887A3... - Serine acetyltransferase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=cysE PE=3 SV=1 gi\|28868628, gi\|... - gi\|28868628\|ref\|NP_791247.1\| serine O-acetyltransferase [Pseudomonas syringae pv. tomato str. DC3000...	2.0E-61	[1..251]	[1..251]
gi\|67156541\|ref\|... - Serine O-acetyltransferase [Azotobacter vinelandii AvOP] gi\|67086300, gi\|... - gi\|67156541\|ref\|ZP_00418134.1\| Serine O-acetyltransferase [Azotobacter vinelandii AvOP], gi\|67086300...	6.0E-61	[5..258]	[1..254]
gi\|26987576, gi\|... - gi\|26987576\|ref\|NP_743001.1\| serine O-acetyltransferase [Pseudomonas putida KT2440], gi\|24982251\|gb\|... tr\|E4R520\|E4R520... - Serine acetyltransferase OS=Pseudomonas putida (strain BIRD-1) GN=cysE PE=3 SV=1	1.0E-60	[1..256]	[1..260]

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Predicted Domain #1

Region A:
Residues: [1-258]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFERVREDIQ SVFHRDPAAR NALEVLTCYP GLHAVWLHRL AHGLWTSGWK WLARLVSNFG  60
   61 RWMTGIEIHP GARIGRRFFI DHGMGIVIGE TAEIGDDVTL YQGVTLGGTT WNKGKRHPTL 120
  121 GNNVVVGAGA KVLGPFTVGE GAKVGSNAVV TKEVPPGATV VGIPGRIIMR EDSEQQAKRQ 180
  181 AMAEKLGFDA YGVSQDMPDP VARAIGQLLD HLQAVDGRLE GMCQALTALG SDYCAKDLPV 240
  241 LREEDFAGVK DEDGNPAA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	40.221849
Match:	1sstA
Description:	Serine Acetyltransferase- Complex with CoA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
O-acyltransferase activity	2.96382736707397	bayes_pls_golite062009
catalytic activity	2.59855937987599	bayes_pls_golite062009
serine O-acetyltransferase activity	2.10697394347266	bayes_pls_golite062009
serine O-acyltransferase activity	2.10697394347266	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	2.00406253837813	bayes_pls_golite062009
acyltransferase activity	1.97801068671318	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.94103020303346	bayes_pls_golite062009
O-acetyltransferase activity	1.93041803216972	bayes_pls_golite062009
transferase activity	1.3237300007392	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: