YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|107104591
Organism:	Pseudomonas aeruginosa PACS2
Length:	211 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|107104591.

Description	E-value	Query Range	Subject Range
gi\|94417202, gi\|... - gi\|94417202\|ref\|ZP_01297021.1\| hypothetical protein PaerP_01000998 [Pseudomonas aeruginosa PA7], gi\|...	6.0E-47	[1..211]	[1..211]
gi\|49079260 - gi\|49079260\|gb\|AAT49872.1\| PA5489 [synthetic construct]	2.0E-46	[1..211]	[1..211]
gi\|1814074\|gb\|AA... - DsbA [Pseudomonas aeruginosa] gi\|4545238, gi\|1... - gi\|4545238\|gb\|AAD22452.1\|AF116282_1 thiol:disulfide interchange protein DsbA precursor [Pseudomonas ...	2.0E-46	[1..210]	[1..210]
gi\|82737393, gi\|... - gi\|82737393\|ref\|ZP_00900243.1\| thiol:disulfide interchange protein, DsbA family [Pseudomonas putida ... tr\|I7CBH6\|I7CBH6... - Thiol:disulfide interchange protein OS=Pseudomonas putida (strain DOT-T1E) GN=dsbA PE=3 SV=1	6.0E-45	[1..209]	[1..210]
gi\|24981474, gi\|... - gi\|26986872\|ref\|NP_742297.1\| DsbA family thiol:disulfide interchange protein [Pseudomonas putida KT2...	1.0E-44	[1..209]	[1..210]
gi\|2707768 - gi\|2707768\|gb\|AAB92367.1\| disulfide oxidoreductase [Pseudomonas syringae] gi\|213924254, gi... - gi\|213971018\|ref\|ZP_03399139.1\| thiol:disulfide interchange protein DsbA [Pseudomonas syringae pv. t... DSBA_PSESM - Thiol:disulfide interchange protein DsbA OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=dsbA ... DSBA_PSESM - Thiol:disulfide interchange protein dsbA OS=Pseudomonas syringae pv. tomato GN=dsbA PE=3 SV=1	4.0E-43	[1..206]	[1..207]
gi\|104779393, gi... - gi\|95108380\|emb\|CAK13074.1\| thiol:disulfide interchange protein, periplasmic, alkali-inducible [Pseu... gi\|95108380 - gi\|95108380\|emb\|CAK13074.1\| thiol:disulfide interchange protein, periplasmic, alkali-inducible [Pseu...	3.0E-42	[1..209]	[1..211]
gi\|63254245, gi\|... - gi\|66043538\|ref\|YP_233379.1\| DSBA oxidoreductase [Pseudomonas syringae pv. syringae B728a], gi\|63254...	3.0E-42	[1..206]	[1..207]
gi\|71554766, gi\|... - gi\|71734213\|ref\|YP_272562.1\| thiol:disulfide interchange protein DsbA [Pseudomonas syringae pv. phas...	3.0E-42	[1..206]	[1..207]
gi\|68347896, gi\|... - gi\|70733597\|ref\|YP_257237.1\| DsbA family thiol:disulfide interchange protein [Pseudomonas fluorescen...	4.0E-42	[1..209]	[1..209]

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Predicted Domain #1

Region A:
Residues: [1-211]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNLILTAML AMASLFGMAA QADDYTAGKE YVELSSPVPV SQPGKIEVVE LFWYGCPHCY  60
   61 AFEPTIVPWS EKLPADVHFV RLPALFGGIW NVHGQMFLTL ESMGVEHDVH NAVFEAIHKE 120
  121 HKKLATPEEM ADFLAGKGVD KEKFLSTYNS FAIKGQMEKA KKLAMAYQVT GVPTMVVNGK 180
  181 YRFDIGSAGG PEETLKLADY LIEKERAAAK K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	32.30103
Match:	2ijyA
Description:	No description for 2ijyA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits