YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|107104165
Organism:	Pseudomonas aeruginosa PACS2
Length:	134 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|107104165.

Description	E-value	Query Range	Subject Range
gi\|49077240 - gi\|49077240\|gb\|AAT49653.1\| PA5066 [synthetic construct]	238.0	[0..1]	[134..1]
HIS3_PSEAB - Phosphoribosyl-AMP cyclohydrolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=hisI PE=3 SV=1	238.0	[0..1]	[134..1]
HIS3_PSEA7 - Phosphoribosyl-AMP cyclohydrolase OS=Pseudomonas aeruginosa (strain PA7) GN=hisI PE=3 SV=1	237.0	[0..1]	[134..1]
HIS3_AZOVD - Phosphoribosyl-AMP cyclohydrolase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=hisI PE=3... gi\|53612300, gi\|... - gi\|67158084\|ref\|ZP_00419174.1\| Phosphoribosyl-AMP cyclohydrolase [Azotobacter vinelandii AvOP], ref\|...	233.0	[0..1]	[134..1]
gi\|1224005 - gi\|1224005\|gb\|AAA92106.1\| HisI [Azotobacter chroococcum] HIS3_AZOCH - Phosphoribosyl-AMP cyclohydrolase OS=Azotobacter chroococcum mcd 1 GN=hisI PE=3 SV=1	230.0	[0..1]	[134..1]
HIS3_PSEPF - Phosphoribosyl-AMP cyclohydrolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=hisI PE=3 SV=1	229.0	[0..1]	[134..1]
HIS3_PSEPK - Phosphoribosyl-AMP cyclohydrolase OS=Pseudomonas putida (strain KT2440) GN=hisI PE=3 SV=1 tr\|E4R9G9\|E4R9G9... - Phosphoribosyl-AMP cyclohydrolase OS=Pseudomonas putida (strain BIRD-1) GN=hisI PE=3 SV=1 HIS3_PSEP1 - Phosphoribosyl-AMP cyclohydrolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=hisI PE=3 SV=1	225.0	[0..1]	[131..1]
HIS31_PSEF5 - Phosphoribosyl-AMP cyclohydrolase 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=hisI1...	225.0	[0..1]	[131..1]
HIS3_PSE14 - Phosphoribosyl-AMP cyclohydrolase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)...	224.0	[0..1]	[131..1]
gi\|95112981 - gi\|95112981\|emb\|CAK17709.1\| phosphoribosyl-AMP cyclohydrolase [Pseudomonas entomophila L48] HIS3_PSEE4 - Phosphoribosyl-AMP cyclohydrolase OS=Pseudomonas entomophila (strain L48) GN=hisI PE=3 SV=1	223.0	[0..1]	[131..1]

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Predicted Domain #1

Region A:
Residues: [1-134]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDWLDEIHW NADGLVPAIA QDHETGRVLM MAWMNREALA LTASENRAIY WSRSRGKLWR  60
   61 KGEESGHVQK LHELRLDCDA DVVILMVEQV GGIACHTGRE SCFYRVFENG AWKTVDPVLK 120
  121 DPDAIYEHAG HHHE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	48.09691
Match:	1zpsA
Description:	Crystal structure of Methanobacterium thermoautotrophicum phosphoribosyl-AMP cyclohydrolase HisI
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits