| Protein: | CY561_MOUSE |
| Organism: | Mus musculus |
| Length: | 250 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CY561_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
319.0 | [0..1] | [250..276] |
|
|
273.0 | [0..4] | [250..5] |
|
|
271.0 | [0..4] | [250..5] |
|
|
271.0 | [0..4] | [250..5] |
|
|
268.0 | [0..1] | [250..1] |
|
|
267.0 | [0..1] | [250..1] |
|
|
267.0 | [0..4] | [250..27] |
|
|
265.0 | [0..21] | [250..31] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MEHSSASVPA ALPYYVAFSQ LLGLTVVAVT GAWLGLYRGG IAWESSLQFN VHPLCMVIGM 60
61 IFLQGDALLV YRVFRREA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [79-250] |
1 11 21 31 41 51
| | | | | |
1 KRTTKILHGL LHVFAFIIAL VGLVAVFDYH KKKGYADLYS LHSWCGILVF VLYFVQWLVG 60
61 FSFFLFPGAS FSLRSRYRPQ HIFFGATIFL FSVGTALLGL KEALLFKLGS KYSTFEPEGV 120
121 LANVLGLLLV CFGVVVLYIL AQADWKRPSQ AEEQALSMDF KTLTEGDSPS PQ
|
| Detection Method: | |
| Confidence: | 1.42 |
| Match: | 1kqfC |
| Description: | Formate dehydrogenase N, cytochrome (gamma) subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ion transmembrane transporter activity | 0.89088306929437 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.890158298449879 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.814112055419571 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.812206012699042 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 0.773137851186839 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.762114046778875 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.679179334119734 | bayes_pls_golite062009 |
| transporter activity | 0.629864849462794 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.622501423809131 | bayes_pls_golite062009 |
| catalytic activity | 0.349353660965659 | bayes_pls_golite062009 |
| ubiquinol-cytochrome-c reductase activity | 0.143276144501499 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor | 0.143276144501499 | bayes_pls_golite062009 |
| binding | 0.0102629993652836 | bayes_pls_golite062009 |
