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View Structure Prediction Details

Protein: DEFA4_MOUSE
Organism: Mus musculus
Length: 92 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DEFA4_MOUSE.

Description E-value Query
Range
Subject
Range
DFA14_MOUSE - Alpha-defensin 14 (Fragment) OS=Mus musculus GN=Defa14 PE=2 SV=2
134.0 [0..9] [90..1]
gi|9247199 - gi|9247199|gb|AAB32271.2| cryptdin 17; Cryp17 [Mus sp.]
129.0 [0..12] [90..1]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLVLLSAL VLLAFQVQAD PIQNTDEETK TEEQPGEEDQ AVSISFGGQE GSALHEKSLR  60
   61 GLLCYCR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 28.920819
Match: PF00879.9
Description: No description for PF00879.9 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.370 N/A N/A g.15.1 Ovomucoid/PCI-1 like inhibitors
View Download 0.244 N/A N/A a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.216 N/A N/A a.5.7 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain

Predicted Domain #2
Region A:
Residues: [68-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGHCKRGERV RGTCGIRFLY CCPRR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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