YRC Public Data Repository - Protein Structure Prediction

Protein:	PLPP_MOUSE
Organism:	Mus musculus
Length:	292 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLPP_MOUSE.

Description	E-value	Query Range	Subject Range
PLPP_RAT - Pyridoxal phosphate phosphatase OS=Rattus norvegicus GN=Pdxp PE=1 SV=2	211.0	[0..1]	[290..1]
PDXP - pyridoxal (pyridoxine, vitamin B6) phosphatase	206.0	[0..1]	[292..1]
PLPP_BOVIN - Pyridoxal phosphate phosphatase OS=Bos taurus GN=PDXP PE=1 SV=1	205.0	[0..1]	[292..1]
gi\|47226097 - gi\|47226097\|emb\|CAG04471.1\| unnamed protein product [Tetraodon nigroviridis]	186.0	[0..2]	[291..13]
gi\|37362312, gi\|... - gi\|47086593\|ref\|NP_997891.1\| hypothetical protein LOC792824 [Danio rerio], gi\|37362312\|gb\|AAQ91284.1... gi\|187608693, gi... - gi\|187608693\|ref\|NP_001120188.1\| hypothetical protein LOC100145229 [Xenopus (Silurana) tropicalis], ...	182.0	[0..2]	[291..4]
gi\|114660450 - gi\|114660450\|ref\|XP_001162359.1\| PREDICTED: hypothetical protein [Pan troglodytes]	180.0	[0..3]	[291..12]
gi\|109127253 - gi\|109127253\|ref\|XP_001084229.1\| PREDICTED: similar to pyridoxal (pyridoxine, vitamin B6) phosphatas...	177.0	[0..3]	[291..144]

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Predicted Domain #1

Region A:
Residues: [1-292]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARCERLRGA ALRDVLGQAQ GVLFDCDGVL WNGERIVPGA PELLQRLARA GKNTLFVSNN  60
   61 SRRARPELAL RFARLGFAGL RAEQLFSSAL CAARLLRQRL SGPPDASGAV FVLGGEGLRA 120
  121 ELRAAGLRLA GDPGEDPRVR AVLVGYDEQF SFSRLTEACA HLRDPDCLLV ATDRDPWHPL 180
  181 SDGSRTPGTG SLAAAVETAS GRQALVVGKP SPYMFQCITE DFSVDPARTL MVGDRLETDI 240
  241 LFGHRCGMTT VLTLTGVSSL EEAQAYLTAG QRDLVPHYYV ESIADLMEGL ED

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	53.154902
Match:	2cfrA
Description:	No description for 2cfrA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits