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View Structure Prediction Details

Protein: CIDA_MOUSE, CIDE...
Organism: Mus musculus
Length: 217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIDA_MOUSE, CIDE....

Description E-value Query
Range
Subject
Range
CIDEA_MOUSE - Cell death activator CIDE-A OS=Mus musculus GN=Cidea PE=1 SV=2
367.0 [0..1] [217..1]
gi|114672127 - gi|114672127|ref|XP_523993.2| PREDICTED: cell death-inducing DFFA-like effector a [Pan troglodytes]
340.0 [0..1] [216..1]
CIDEA - cell death-inducing DFFA-like effector a
339.0 [0..1] [216..1]
gi|109506731 - gi|109506731|ref|XP_214551.4| PREDICTED: similar to cell death-inducing DNA fragmentation factor, al...
333.0 [0..14] [217..260]
gi|109121516 - gi|109121516|ref|XP_001094509.1| PREDICTED: similar to cell death-inducing DFFA-like effector a isof...
329.0 [0..1] [216..1]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METARDYAGA LIRPLTFMGL QTKKVLLTPL IHPARPFRVS NHDRSSRRGV MASSLQELIS  60
   61 KTLDVLVITT GLVTLVLEED GTVVDTEEFF QTLRDNTHFM ILEKGQKWTP GSKY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.0
Match: 2eelA
Description: No description for 2eelA was found.

Predicted Domain #2
Region A:
Residues: [115-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPVCKQPKKS GIARVTFDLY RLNPKDFLGC LNVKATMYEM YSVSYDIRCT RFKAVLRNLL  60
   61 RFMSYAAQMT GQFLVYAGTY MLRVLGDTEE QPSPKPSTKG WFM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.884 0.002 intracellular a.46.1 Methionine synthase domain


YRC Informatics Platform - Version 3.0
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