YRC Public Data Repository - Protein Structure Prediction

Protein:	OAZ2_MOUSE
Organism:	Mus musculus
Length:	189 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OAZ2_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|9295421 - gi\|9295421\|gb\|AAF86963.1\| ornithine decarboxylase antizyme [Trachemys scripta elegans]	300.0	[0..4]	[189..38]
OAZ1_CHICK - Ornithine decarboxylase antizyme 1 OS=Gallus gallus GN=OAZ PE=2 SV=3	300.0	[0..1]	[189..33]
OAZ1_RAT - Ornithine decarboxylase antizyme 1 OS=Rattus norvegicus GN=Oaz1 PE=1 SV=3	292.0	[0..1]	[189..36]
OAZ1_XENLA - Ornithine decarboxylase antizyme 1 OS=Xenopus laevis GN=oaz1 PE=2 SV=2	290.0	[0..19]	[189..45]
OAZ1_MOUSE - Ornithine decarboxylase antizyme 1 OS=Mus musculus GN=Oaz1 PE=1 SV=3	289.0	[0..1]	[189..36]
OAZ1_BOVIN - Ornithine decarboxylase antizyme 1 OS=Bos taurus GN=OAZ1 PE=2 SV=3	287.0	[0..17]	[189..53]
gi\|10304395 - gi\|10304395\|gb\|AAG16236.1\|AF291576_1 ornithine decarboxylase antizyme [Torpedo marmorata]	287.0	[0..1]	[189..26]
OAZ1_MESAU - Ornithine decarboxylase antizyme 1 OS=Mesocricetus auratus GN=OAZ1 PE=2 SV=3	285.0	[0..1]	[185..36]
OAZ2_PONAB - Ornithine decarboxylase antizyme 2 OS=Pongo abelii GN=OAZ2 PE=2 SV=1 OAZ2 - ornithine decarboxylase antizyme 2 OAZ2_PONPY - Ornithine decarboxylase antizyme 2 - Pongo pygmaeus (Orangutan) gi\|201027428 - gi\|201027428\|ref\|NP_001128381.1\| ornithine decarboxylase antizyme 2 [Macaca mulatta]	285.0	[0..1]	[189..1]

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Predicted Domain #1

Region A:
Residues: [1-189]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINTQDSSIL PLSKCPQLQC CRHIVPGPLW CSDAPHPLSK IPGGRGGGRD PSLSALIYKD  60
   61 EKLTVTQDLP VNDGKPHIVH FQYEVTEVKV SSWDAVLSSQ SLFVEIPDGL LADGSKEGLL 120
  121 ALLEFAEEKM KVNYVFICFR KGREDRAPLL KTFSFLGFEI VRPGHPCVPS RPDVMFMVYP 180
  181 LDQNLSDED

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	57.09691
Match:	1zo0A
Description:	NMR structure of antizyme isoform 1 from rat
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits