| Protein: | gi|116008110, gi... |
| Organism: | Drosophila melanogaster |
| Length: | 1704 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|116008110, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
1670.0 | [0..1] | [1666..1] |
|
Region A: Residues: [1-326] |
1 11 21 31 41 51
| | | | | |
1 MSNELSELIA LGCPDLAAQK PQGGSTQVEL ILNTERRLSI KQMTATDLAT LRAAAAAEAE 60
61 ARSRAQAEAE ALAIAQEQFR QAREAESKAR ARAALEVQAQ LQRVMESEKR RQQEEEERRI 120
121 RQQAEEEQED DEDDDNDEEE ELTKGSLPTN SGPRERIASL PCNIDDAMEM HLLNVSQPKA 180
181 SSKDDSPPKK STSHIADSIE LLRMQRAARD ARSHNRSRER SISPDRNRER SAAPDRLQSS 240
241 ASMSSLDSAS ASASRQPSKA GSRRGSTTSA TGVEPPLMAA PPQPTKFPLT KTVSAPNMDR 300
301 RRSSLTSLFP GPSPLVAPEP SLHTNP
|
| Detection Method: |  |
| Confidence: | 38.09691 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [327-469] |
1 11 21 31 41 51
| | | | | |
1 DPRVQEQIEE DRRRRRMDDG YREIPSGKMV HRTKTPPPVG TNLGVSLKRV TAPSGSITIK 60
61 PKESPMLGVV LRRVEKKTVP QKSILDDDKP LYHFSIVRSD HKEHVPAQKP KPKPAPPAAK 120
121 PSPGGILTGP QVIRNAPKQP VPV
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [470-604] |
1 11 21 31 41 51
| | | | | |
1 KPQRPMPGVP ITITKIEGDK IIIIKKIIVP KNSKIPEQYL QMSEDAGKPA NTVPSAVSSS 60
61 AAPSPSLRTK EESQPAMQKP TPPPASGQQF FQVVSPQFAS VLSSSIPESK CAVRSPISSP 120
121 LAIRKSRPPL LPSSP
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1uffA |
| Description: | Solution structure of the first SH3 domain of human intersectin2 (KIAA1256) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.375837873453985 | bayes_pls_golite062009 |
| protein binding | 0.25580402341401 | bayes_pls_golite062009 |
|
Region A: Residues: [605-720] |
1 11 21 31 41 51
| | | | | |
1 KSTPPLPRKH HPLAYNAATG TISSASGAAL PSRLMATIAS SPASSISLSS CSSPSSSPPP 60
61 PVPCRAPKNA SRPVAVTAAP PPSTSNEISL DKLLQQQQEL EEKSAAATNS AKMDAN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [721-781] |
1 11 21 31 41 51
| | | | | |
1 FYDAEIEMMN KYLKSLPDYS ELDRKLHQEF QECEDLYDKI KRQQQPLAKS NSQQSVTKAV 60
61 G
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [782-837] |
1 11 21 31 41 51
| | | | | |
1 PGVPAISSGL SKSSSINFAQ NPSSRGAAPR LAYPSIFSQA AGEPKLQRSI SSSNMP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [838-1059] |
1 11 21 31 41 51
| | | | | |
1 ISAPNSMRPL PTKNGLQSGS NLSLNKQLMN EFWSENLTSS QKRQTPKRTF WNYEKICGAQ 60
61 LGDAGQPFKV DAKTAKKLAI FDPTVAEAAQ KELQRPQQSQ VPQNQPHKLQ KNASLSHLDL 120
121 KVRQAVTKDD LYKLICNEQS PLAGSNFVSR VPVKQQFPAQ QQQVLPKSMS MTHVPGGGQP 180
181 MGAPLLRTSS RTHIPSYMKN LPSLSRSTSN SAILMTQPRK EP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1060-1290] |
1 11 21 31 41 51
| | | | | |
1 PPKEPLKAPA PLPAIAAPTV GKPSGVLKSS SSSCVPSPRC AAAFFRRPQE ANNPQQQHHQ 60
61 PLQKPQQVAP IEESGPGDSA SLERKSEKSN STLSTSSFTV TNCCTTHLPQ LSKFTSSFHI 120
121 APTTATTTAA TATPTPTGAA TTSDQQQQSG GTPAMVAANL EVPTSSSSSA ATKRQKDVDN 180
181 KLEKCLNDML KLKTSSNNNS TSNSNNNAIM SHSLTGEHKD PKTALEGPTS S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1291-1479] |
1 11 21 31 41 51
| | | | | |
1 SSSSSSKYIG ESQIPVPVQL YDPQKPLLQQ QQQQQRICYP IGKSNSTSQL PMGGYQRLLQ 60
61 HQQQQHHQQQ QQQHQEQQQY PQHKRPFLNW NSFACSAMNG ASDPFMQQQH MPAHQQQQHL 120
121 PHKLQQSYSS SHVPKQAPKS GLAMFLQKNT NKENKFGQPM QQQPPGMMPQ MYGYQAPQQQ 180
181 SKIGYPRTG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1480-1556] |
1 11 21 31 41 51
| | | | | |
1 APLTHSASFS SAQRPTALQF HQQHQQQQHL QQQQQHPQQQ QHQHSSFGVG MMSRNYYNMP 60
61 KQPERKPLQT FDPYAYP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1557-1614] |
1 11 21 31 41 51
| | | | | |
1 KPNQMQPVKY QQQQQHPHTQ FQNASAGGGG GGAAGLQYDP NTNTQLFYAS PASSSSNK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1615-1704] |
1 11 21 31 41 51
| | | | | |
1 QPQQPQQQQQ QQQSQLQQSN SVIFNHSGQQ HQPHQQQQNE MSKSALGLHF IEVDSIPPIY 60
61 FCLVFVLHMC LNQKCPLTTR CRFQRKFAPK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
