| Protein: | gi|113194839, gi... |
| Organism: | Drosophila melanogaster |
| Length: | 807 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113194839, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
739.0 | [0..22] | [775..1] |
|
Region A: Residues: [1-807] |
1 11 21 31 41 51
| | | | | |
1 MSGDSDRWLN GTQTLDRPVH QCGCFLCLSL QFTLNSQLSG RTETTLGAIL DSRCYLEGGG 60
61 SAESFLATED LAVGSIIGKL RINGDANAET GDINLSLREK NAPVEIHPGT KELALSVELD 120
121 KEGVRGPSSI YVNVICIRRH STDPSFVIPV NVRVTDVNDN APQWIGTPYT LTLSEVTVPG 180
181 TRILQGARAE DADQPGPFST VEYQVLPGPY SEYVQFLNPL EGTLVLKKAL DYEQLQNFTV 240
241 KLRAQDQGTP PRHSDTLLRV VITDADDQNP KFQRESYSAE IPADGRPGEL RMRPEPLKAV 300
301 DQDEGICAPI QYTIVQSQDA KYFRIHPHNG AISLLTPIGY ADVANGATLV VKATQIDNPD 360
361 RYALTTVQLT RPGSHSDLST LAFVQKRFVM RIREDTAVGN RILALPTNKP GKHLKYVIPD 420
421 PVNSQFFSVG SLGELVLAKP LDYEKMTKHE FQVLATDGMT NSTAELTLEV IDVNDWEPRF 480
481 RETHYEFMVP KSQSLQSRAD SFEGVLIGKV EAADGDRNDK LELSLRGQHA GLFEIDSTGN 540
541 IYMRPEQLQS LNESTVHLIA IATDTGVPPR STSVPVSVTM EGLTLARSGW NSNMLGMFGM 600
601 IMGLFLMIIV ALSCYIVRSK KQGKSASSGL GLGRNRVHSQ AHSSVSSANL VTHEKLAGNG 660
661 NGNGASVTSG GVSVLHMKHG GNITMANPMN NGLHHVASGA SSSMALGSSA ALLERERERE 720
721 RDRERQRESY AATVRISRAS ANGQLFEEDE IEHDSLQTEN NNRKVAATGV ASGGVTTIST 780
781 TPANAGSNLL SATDAMGSSE NNLTVYF
|
| Detection Method: |  |
| Confidence: | 91.0 |
| Match: | 1q55A |
| Description: | W-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography |
Matching Structure (courtesy of the PDB): |
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