| Protein: | mld-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1728 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mld-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
1150.0 | [0..831] | [1725..320] |
|
Region A: Residues: [1-235] |
1 11 21 31 41 51
| | | | | |
1 MLTMHIKRPF ICTLHIRHMY LCMFLPCINR DDGLPQEICR QCMAQFLMVA KFRRKCVRMQ 60
61 QRLQDFAQEI SDRQTARQAK RQQKVQKKTH DRWLQLEPTS HEEQQPIRKR RMVSESDGDS 120
121 TAAAAAAEAA TATATTPAKQ VRTDFESLPP PKPSPQQHRV RKYRTLSIDC EMERPAASIN 180
181 ASSMPWKTKA ARKELSENWA SSCSTAVMSP NRQRSSTSSS EHMSDLSVGP CCGFE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [236-331] |
1 11 21 31 41 51
| | | | | |
1 SDSNPSSTSN SARRTVILVK QQSPEKTSPM YDLMPRRGRR PRKAPIYMPA KRQRRSLVRK 60
61 EPLYRKAQPV NEENKKSDQK DIYPKESRME GLAPSC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [332-536] |
1 11 21 31 41 51
| | | | | |
1 DEAIDSTSDA PMEVASNVVQ KKCDEICLNG LIDSRNQLGA MEMEPVNEMI ASNGVDKELT 60
61 LSVQNNKETT SEEQIFEATS VIKESVQPEQ SAEDIQVRTE IESIANDIRA EADLVQSEEL 120
121 TSSTETSESQ PKAVEQLESM GKQESYALPQ NMEAHESVQQ TQTVDESDSA DQREIIVSIP 180
181 LEVLDENLQR RLCVDPETEA ANRQS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [537-756] |
1 11 21 31 41 51
| | | | | |
1 ADPKEFALRP DDVNNNENDE NFCQSATADS FNSAVALRTN KIEATPPGGT DSDDTDTDEV 60
61 PIVPSGPTPM DFMAEFAKHC ANGIEQLKVT TPVPSPTPSD LVPLNDLEAK QKLEVEMNDV 120
121 ETTLNGILNE MQDQHMYTPN CAHIDEFLTP ADYATLTEQE SSVSSPPNPF EQSSVAEPKD 180
181 EKPSATEDPF DNSNFTNELI GFQNDIPCFE NIETPEEGQN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [757-861] |
1 11 21 31 41 51
| | | | | |
1 LHLELTQFLR DLQPSQSDPP AGEQVEKIEM ETQPSTVQMD VQSNLPVQAA DTQPQNESAN 60
61 HSPFESPISS PQVQSQIELQ MEPQIETQMQ PQIETRMQHD VLSVQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [862-1002] |
1 11 21 31 41 51
| | | | | |
1 SPQNHQPQVQ SHDQSQMQHQ IPPQIEPQIE VQNQEQNTLQ LVPQAQHQVV PHVQLQSQLV 60
61 PHVQTQGTTT TVTYEQIYQQ HIVQQTVQQS SNKMQVISLP SAGSETTRQW QTQQSQQQQQ 120
121 VQWSSVGGLE AIKSAPVESV A
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1003-1070] |
1 11 21 31 41 51
| | | | | |
1 PTTTTYYISA SDLYPQQTET YTMLQPASNE SYVIEQVNHQ QQHCQQQIQM SQQQHQRQHQ 60
61 QQQAQQQQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1071-1300] |
1 11 21 31 41 51
| | | | | |
1 QPIMILIQQP EIQQPVASAS NPQQAPLHIY NAATSNDVHQ MQHTQRQQIR QQYQHQQYQR 60
61 LQQPQQTRVV QSHPVLGMPG ATSISTKVTP IPVTAARGRP LTLKCRFCHN GPRFSSSLEY 120
121 SRHIIDLHPA VAPFNCPHCP MAFAGRTKRS QHILSHHVVQ QYQCGQCSHV FPAQKALDVH 180
181 IQRFHMTLKT DPSGAVKVED VQLQITSERR PRGRPYKPRL QLQQHQLQPQ
|
| Detection Method: | |
| Confidence: | 3.37 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [1301-1421] |
1 11 21 31 41 51
| | | | | |
1 QKLQVQQHQQ QQKALQQLPQ AQHHQQQQQP QLQQEVLQQV QQLQVQVQPQ QHQQHQQVLQ 60
61 VQQPQQQPLM QPQSPHPSTV EMQASPTTPR KILCCPDCED CTSGHSHANE QFEELQTLQA 120
121 P
|
| Detection Method: | |
| Confidence: | 24.522879 |
| Match: | 1ubdC |
| Description: | Ying-yang 1 (yy1, zinc finger domain) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1422-1547] |
1 11 21 31 41 51
| | | | | |
1 PTVLTPPSTI VSVPSPQPMV YSQHITMPSP EQSEPDSTTT LRQYRKRGVI VGPQGPLHLA 60
61 TPVASPSPSS SPSSSTVDHI PPASPATPAS PAPPPSPAVA STVQVSELRT SHHCLYCEER 120
121 FTNEIS
|
| Detection Method: | |
| Confidence: | 62.154902 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [1548-1647] |
1 11 21 31 41 51
| | | | | |
1 LKKHHQLAHG ALTTMPYVCT ICKRGYRMRT ALHRHMESHD VEGRPYECNI CRVRFPRPSQ 60
61 LTLHKITVHL LSKPHTCDEC GKQFGTESAL KTHIKFHGAH
|
| Detection Method: | |
| Confidence: | 23.522879 |
| Match: | 2gliA |
| Description: | Five-finger GLI1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.414217765611205 | bayes_pls_golite062009 |
|
Region A: Residues: [1648-1728] |
1 11 21 31 41 51
| | | | | |
1 MKTHLPLGVF RNEDAASKSP SNNNSHASSD KLENPATPIE ETPLTPMSSG GHLYHSPDEY 60
61 PNSVESCAGN SVALESYATT P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
