| Protein: | gi|116008070, gi... |
| Organism: | Drosophila melanogaster |
| Length: | 1056 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|116008070, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
773.0 | [0..111] | [1035..13] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MAVSNIVCEW LRALGLAQYA ESFLDNGYDD LEICKQVGDP DLDAIGVENP AHRHKLLKSI 60
61 RSLREKGAAS VYFMLNDPNS L
|
| Detection Method: |  |
| Confidence: | 20.0 |
| Match: | 2eaoA |
| Description: | No description for 2eaoA was found. |
|
Region A: Residues: [82-360] |
1 11 21 31 41 51
| | | | | |
1 SGSMEILCET PPNNELELVL REQLETDGVR LTAHPYSTPG LASVYCELLM APFGDILATI 60
61 ERARQAAWAE RSPLHSAAQV VGGSGGAGGS TGSGSGGAAS GGSGGSSGVL HHRQQHGHRG 120
121 HSMHGAGLPN SHSQPIYVPG KYSPSSCLSD KEEDEIYGFG YGVFAPRVAR GGLTQQQQLL 180
181 QQQTLQTQQS IQQQQQQMQQ QQQQLPIVPG QQQQGPHQHQ TLPPNVAHLN FVQQNCLSPR 240
241 SAYFYEFPPT AEGRETKKRT TLARLLKGLK TVNRRDRNN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [361-542] |
1 11 21 31 41 51
| | | | | |
1 QQNGAQARAA NDRLRHFQMI NGGAGGQQHS FEETIHRLKV QEAMRKKEKF QREHEEILRD 60
61 IRQGLLQMSR GEGRMDDTYM YDEALRTGGG MGIAGLGMPL GVGGNGGGGG AAHYAVSALH 120
121 HQGHWYDEPP YESDPDDFLM AGLNCGPAAT IQGGRVRFSN NRESTGVISL RSAGDISLPQ 180
181 RG
|
| Detection Method: | |
| Confidence: | 15.522879 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [543-680] |
1 11 21 31 41 51
| | | | | |
1 PPRRGLIVPQ QPPNPPTIIP LTHARSHDRE SGDYAGSISD LQSVTSRFST VSIGTNNCTA 60
61 RYRTLSGGIG ESPSLSPSPS SDYEDIGVTR GHGCLPPSLL AAKAKKNGLP HGKANTICQK 120
121 ATVHHSGEMR SSAKEIGA
|
| Detection Method: | |
| Confidence: | 16.69897 |
| Match: | 2eyzA |
| Description: | No description for 2eyzA was found. |
|
Region A: Residues: [681-972] |
1 11 21 31 41 51
| | | | | |
1 FNENGRNFVA TKDTSRDFSN SQDNTDRGSM SDQAFACSAS SVESLPSASG SSTQALVRPG 60
61 SPHSSISAED RTSMASCICK AKALVDSLPN PYDKEALKFK KGDLIDVLSM NASGIWKGRC 120
121 HGRVGHFKFI NVEVLPEQRM KNSSSKTLAA GSRLANSGNG SHNGGPCSVE DLLIRIGLKE 180
181 YTSVFVLNGY EDLELFKELE PADLDYLGIL NQEHRAKLLT AVQLLHDIEC SDVDIPGSSS 240
241 ENDEARLNNI NMKHGASPFG RRHFPRDSGC YEGSPLPSSQ TPTQAVNSTD ES
|
| Detection Method: | |
| Confidence: | 12.0 |
| Match: | 2h8hA |
| Description: | No description for 2h8hA was found. |
| Term | Confidence | Notes |
| binding | 0.434026084000615 | bayes_pls_golite062009 |
| protein binding | 0.31534665043077 | bayes_pls_golite062009 |
|
Region A: Residues: [973-1056] |
1 11 21 31 41 51
| | | | | |
1 NSLDDVVTKC SSEIMKRVES ARRCKDNPFK TTLPGGGRLG KKSFLGGNGL MADDTLTRGG 60
61 LSEKSSDSGV SSSSLSSGPL KSST
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
