| Protein: | CG18208-PA |
| Organism: | Drosophila melanogaster |
| Length: | 699 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG18208-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
342.0 | [0..92] | [386..1] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MDYSRLNANI NTGNISTDDF LAVFSTGKPD NATLNPPLLS VDGQLTLPPG SGYVNVNDTI 60
61 FFLNGSFYNS SLQLAAGFYN QSSASGATSG N
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [92-402] |
1 11 21 31 41 51
| | | | | |
1 LTNPNHTEVH WDGRYPSGYT LTHIVIASII VTILMIIIVV GNMLVIIAIA TEKSLKNIQN 60
61 WFIASLAVAD FFLGLIIMPF SLANELMGYW IFGSWWCDIH SAMDVLLCTA SIMNLCLISL 120
121 DRYWSITKAV DYLKSRTPAR AAVMITAVWI MSALICIPPL LGWKVKMPEG PLPKCELSED 180
181 IGYVLYSALG SFYIPSCIMV FVYIRIYFAA KARARRGIKK HPRKTNNEQV TSFTTAKKGT 240
241 IPMPSSSGVS ALQLHQQRQI ATIETPPNSA SLPMQIPTVT MDLASDISTS EAGELEAVAA 300
301 QTVLAYANPN G
|
| Detection Method: | |
| Confidence: | 46.154902 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [403-584] |
1 11 21 31 41 51
| | | | | |
1 AGTNSVTVVS SGNGGPGASG VPPSSPKETL QVSTIATGRV GLNVPVPPSM GSNSSINVLN 60
61 NNNGTVAMDG GATAAGGGNG SAVATPGGLQ QTGGNELRVS PIAGRCRALS VGVDTDMVSE 120
121 FDPSSSDSGV VSRCAVVKPL KFRLCQPIFG RKSSNQQRRN EAKAAAKNQQ SSGVASKNQQ 180
181 QQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [585-699] |
1 11 21 31 41 51
| | | | | |
1 QQQQQQQVVK SELEPAIPKT PKPRDPEKEK RRIARKKEKR ATLILGLIMG SFIACWLPFF 60
61 FLYILVPACS SHCNIPESAF AVAFWLGYMN SALNPAIYTI FNKDFRRAFR RILFK
|
| Detection Method: | |
| Confidence: | 4.25 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
