| Protein: | Dscam-PAQ |
| Organism: | Drosophila melanogaster |
| Length: | 2020 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dscam-PAQ.
| Description | E-value | Query Range |
Subject Range |
|
|
1520.0 | [0..3] | [2020..3] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE 60
61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120
121 NQFGSIISRD VHVRAVVSQF YITE
|
| Detection Method: |  |
| Confidence: | 75.69897 |
| Match: | 2v5sA |
| Description: | No description for 2v5sA was found. |
|
Region A: Residues: [145-266] |
1 11 21 31 41 51
| | | | | |
1 AENEYVIKGN AAVVKCKIPS FVADFVQVEA WVDEEGMELW RNNATDAYDG KYLVLPSGEL 60
61 HIREVGPEDG YKSYQCRTKH RLTGETRLSA TKGRLVITEP VGTVSPKIST GEDFKHLKGK 120
121 SS
|
| Detection Method: | |
| Confidence: | 20.0 |
| Match: | 2ec8A |
| Description: | No description for 2ec8A was found. |
|
Region A: Residues: [267-913] |
1 11 21 31 41 51
| | | | | |
1 QDLSILCPAQ AYPQPFFRWY KFIEGTTRKQ AVVLNDRVKQ VSGTLIIKDA VVEDSGKYLC 60
61 VVNNSVGGES VETVLTVTAP LSAKIDPPTQ TVDFGRPAVF TCQYTGNPIK TVSWMKDGKA 120
121 IGHSEPVLRI ESVKKEDKGM YQCFVRNDQE SAEASAELKL GGRFDPPVIR QAFQEETMEP 180
181 GPSVFLKCVA GGNPTPEISW ELDGKKIANN DRYQVGQYVT VNGDVVSYLN ITSVHANDGG 240
241 LYKCIAKSKV GVAEHSAKLN VYGLPYIRQM EKKAIVAGET LIVTCPVAGY PIDSIVWERD 300
301 NRALPINRKQ KVFPNGTLII ENVERNSDQA TYTCVAKNQE GYSARGSLEV QVMVAPKIAP 360
361 FDFGDEPSNF GESASVQCLV TSGDFPVSFA WLFNGREINE NVYDVSMVKL GKKISALSID 420
421 IVRDHHAGNY TCVAVNRATS VNFTAELVVN VPPRWILEPT DKAFAQGSDA KVECKADGFP 480
481 KPQVTWKKAV GDTPGEYKDL KKSDNIRVEE GTLHVDNIQK TNEGYYLCEA INGIGSGLSA 540
541 VIMISVQAPP EFTEKLRNQT ARRGEPAVLQ CEAKGEKPIG ILWNMNNMRL DPKNDNRYTI 600
601 REEILSTGVM SSLSIKRTER SDSALFTCVA TNAFGSDDAS INMIVQE
|
| Detection Method: | |
| Confidence: | 56.522879 |
| Match: | 1e07A |
| Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [914-999] |
1 11 21 31 41 51
| | | | | |
1 VPEMPYALKV LDKSGRSVQL SWAQPYDGNS PLDRYIIEFK RSRASWSEID RVIVPGHTTE 60
61 AQVQKLSPAT TYNIRIVAEN AIGTSQ
|
| Detection Method: | |
| Confidence: | 38.0 |
| Match: | 2nziA |
| Description: | No description for 2nziA was found. |
|
Region A: Residues: [1000-1114] |
1 11 21 31 41 51
| | | | | |
1 SSEAVTIITA EEAPSGKPQN IKVEPVNQTT MRVTWKPPPR TEWNGEILGY YVGYKLSNTN 60
61 SSYVFETINF ITEEGKEHNL ELQNLRVYTQ YSVVIQAFNK IGAGPLSEEE KQFTA
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2edxA |
| Description: | No description for 2edxA was found. |
|
Region A: Residues: [1115-1217] |
1 11 21 31 41 51
| | | | | |
1 EGTPSQPPSD TACTTLTSQT IRVGWVSPPL ESANGVIKTY KVVYAPSDEW YDETKRHYKK 60
61 TASSDTVLHG LKKYTNYTMQ VLATTAGGDG VRSVPIHCQT EPD
|
| Detection Method: | |
| Confidence: | 20.0 |
| Match: | 1qg3A |
| Description: | Integin beta-4 subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1218-1688] |
1 11 21 31 41 51
| | | | | |
1 VPEAPTDVKA LVMGNAAILV SWRPPAQPNG IITQYTVYSK AEGAETETKT QKVPHYQMSF 60
61 EATELEKNKP YEFWVTASTT IGEGQQSKSI VAMPSDQVPA KIASFDDTFT ATFKEDAKMP 120
121 CLAVGAPQPE ITWKIKGVEF SANDRMRVLP DGSLLIKSVN RQDAGDYSCH AENSIAKDSI 180
181 THKLIVLAPP QSPHVTLSAT TTDALTVKLK PHEGDTAPLH GYTLHYKPEF GEWETSEVSV 240
241 DSQKHNIEGL LCGSRYQVYA TGFNNIGAGE ASDILNTRTK GQKPKLPEKP RFIEVSSNSV 300
301 SLHFKAWKDG GCPMSHFVVE SKKRDQIEWN QISNNVKPDN NYVVLDLEPA TWYNLRITAH 360
361 NSAGFTVAEY DFATLTVTGG TIAPSRDLPE LSAEDTIRII LSNLNLVVPV VAALLVIIIA 420
421 IIVICILRSK GNHHKDDVVY NQTMGPGATL DKRRPDLRDE LGYIAPPNRK L
|
| Detection Method: | |
| Confidence: | 26.69897 |
| Match: | 2v5yA |
| Description: | No description for 2v5yA was found. |
|
Region A: Residues: [1689-1905] |
1 11 21 31 41 51
| | | | | |
1 PPVPGSNYNT CDRIKRGRGG LRSNHSTWDP RRNPNLYEEL KAPPVPMHGN HYGHAHGNAE 60
61 CHYRHPGMED EICPYATFHL LGFREEMDPT KAMNFQTFPH QNGHAGPVPG HAGTMLPPGH 120
121 PGHVHSRSGS QSMPRANRYQ RKNSQGGQSS IYTPAPEYDD PANCAEEDQY RRYTRVNSQG 180
181 GSLYSGPGPE YDDPANCAPE EDQYGSQYGG PYGQPYD
|
| Detection Method: | |
| Confidence: | 19.69897 |
| Match: | 2fh7A |
| Description: | Crystal structure of the phosphatase domains of human PTP SIGMA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1906-2020] |
1 11 21 31 41 51
| | | | | |
1 HYGSRGSMGR RSIGSARNPG NGSPEPPPPP PRNHDMSNSS FNDSKESNEI SEAECDRDHG 60
61 PRGNYGAVKR SPQPKDQRTT EEMRKLIERN ETGPKQLQLQ QANGAGFTAY DTMAV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
