| Protein: | Lsd-2-PC |
| Organism: | Drosophila melanogaster |
| Length: | 406 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Lsd-2-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
373.0 | [0..35] | [391..8] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MASAEQKHAT GNGTTGNGTA MNDVDQPKDA KDLLPHLESL ERIIKLPVVN AAWDKSQDVY 60
61 GKVKGKNRVF EWALTAAEDC VTRAVTTAAP FVTKLDRPIA YVDQTLVKGI DKLEVKAPII 120
121 KDTPQEIYNQ AKSKVIDVV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [140-406] |
1 11 21 31 41 51
| | | | | |
1 QPHLERVVKF KAAGQQKAAS LKDLAWQKAN EVLATQYGSL AVNGVDTTTA LAERLLEYYF 60
61 PKCESDVEED NVIIVGESYD RDHDQEIDDR FLVAASTVFL SMSLKIITEI VEYVRRNPEI 120
121 VGIIDRELNK FMVSTHKPTQ RQMPVPASED PVLHTVQTVG RLSNKISRRV YRNVSRQIKQ 180
181 VQKGNINDYL SSLIAALKLH QYINFINSSM GTNVEQSGGS SSDACSPFGT TTSTTTTTTT 240
241 SSTSNNKPVV ALPHVAKSKR APAVSSQ
|
| Detection Method: | |
| Confidence: | 49.30103 |
| Match: | 1sziA |
| Description: | Crystal Structure of the C-terminus of TIP47 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.1669494783649 | bayes_pls_golite062009 |
| protein binding | 0.505707524948553 | bayes_pls_golite062009 |
