| Protein: | CG9935-PB |
| Organism: | Drosophila melanogaster |
| Length: | 899 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9935-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
552.0 | [0..6] | [880..19] |
|
Region A: Residues: [1-466] |
1 11 21 31 41 51
| | | | | |
1 MLIASGFLLF QFLSYGLGVP PLVRIGAIFS NQPGMYNSEL AFRYAIHRLN MDKSLLPETT 60
61 VDYYVEYVNR FDSFETVQKV CKLIRVGVQA VFSPTDSVLA THINSICDAL DIPNIGRSAH 120
121 DFSINVYPSK QLVNYAFNDV IQYLNWTRFG ILHEKENGII NLHQLSRSFH GEVHMRQVSR 180
181 DSYVSALNEF KGKEIHNIII DTNSNGISIL LKNILQQQMN EYKYHYLFTS FDLETYDLED 240
241 FKYNFVNITS FRLVDTADVG VKQILKDIGL YSHHIFKKPY LNLHIKKSTI LESEPALMFD 300
301 SVYVFAIGLQ TLEQSHSLTL LNISCEEENS WDGGLSLINY LNAVEWKGLT GPIQFKDGQR 360
361 VQFKLDLIKL KQHSIVKVGE WTPHGHLNIT EPSMFFDAGS MNVTLVVITI LETPYVMMHY 420
421 GKNFTGNERF YGFCVDILET ISREVGFDYI LDLVPDRKYG AKDPET
|
| Detection Method: |  |
| Confidence: | 40.0 |
| Match: | 2e4uA |
| Description: | No description for 2e4uA was found. |
|
Region A: Residues: [467-569] |
1 11 21 31 41 51
| | | | | |
1 GEWNGMVAQL MKYKADLAVG SMTITYARES VIDFTKPFMN LGISILFKVP TSEPTRLFSF 60
61 MNPLAIEIWI YVLIAYFLVS LCIYIVGKLS PIEWKCINAC DLE
|
| Detection Method: | |
| Confidence: | 2.21 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [570-784] |
1 11 21 31 41 51
| | | | | |
1 NISIGNQFSL TDSFWFTIGT FMQQSPDIYP RAMSTRIISS TWGFFSLIIV ASYTANLAAF 60
61 LTTERMINPI ENAEDLASQT EISYGTLDSG STMTFFRDSV IETYKKIWRS MDNKKPSAFT 120
121 TTYEDGIKRV NQGNYAFLME STMLDYIVQR DCNLTQIGGL LDTKGYGIAT PKGSPWRDKI 180
181 SLAILELQER GDIQMLYDKW WKNTDETCTR KNTSK
|
| Detection Method: | |
| Confidence: | 31.30103 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [785-899] |
1 11 21 31 41 51
| | | | | |
1 QSKANSLGLE SIGGVFVVLI AGIIVAAVVA FFEFWYNFRY NYEATPSQSV VNNKYNQDGI 60
61 LESERNYTPP DRSFWIEIAE ELRYASWCMN KQKRPALTRT CSKCTIPKGQ RINKL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
