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View Structure Prediction Details

Protein: SNG1_MOUSE
Organism: Mus musculus
Length: 234 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNG1_MOUSE.

Description E-value Query
Range
Subject
Range
SYNGR1 - synaptogyrin 1
HGNC:11498|MIM:6... - 1
gi|109452116, gi... - gi|109452116|emb|CAK54920.1| SYNGR1 [synthetic construct], gi|109451520|emb|CAK54621.1| SYNGR1 [synt...
310.0 [0..15] [234..15]
SNG1_RAT - Synaptogyrin-1 OS=Rattus norvegicus GN=Syngr1 PE=2 SV=1
310.0 [0..15] [234..15]
gi|55731491 - gi|55731491|emb|CAH92457.1| hypothetical protein [Pongo abelii]
SNG1_PONAB - Synaptogyrin-1 OS=Pongo abelii GN=SYNGR1 PE=2 SV=1
307.0 [0..15] [234..15]
gi|147904463, gi... - gi|213624890|gb|AAI69355.1| P7D11 protein [Xenopus laevis], gi|213623146|gb|AAI69351.1| P7D11 protei...
288.0 [0..15] [234..15]
gi|73969562 - gi|73969562|ref|XP_852509.1| PREDICTED: similar to Synaptogyrin-1 [Canis familiaris]
287.0 [0..34] [234..135]
gi|50728720 - gi|50728720|ref|XP_416251.1| PREDICTED: similar to SYNAPTOGYRIN 1 (P29) [Gallus gallus]
278.0 [0..16] [234..16]
gi|76645654 - gi|76645654|ref|XP_591559.2| PREDICTED: similar to synaptogyrin 2 [Bos taurus]
277.0 [0..1] [232..132]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGAYGAGK AGGAFDPYTL VRQPHTILRV VSWVFSIVVF GSIVNEGYLN NPEEEEEFCI  60
   61 YNRNPNACSY GVTVGVLAFL TCLLYLALDV YFPQISSVKD RKKAVLSDIG VSAFWAFFWF 120
  121 VGFCFLANQW QVSKPKDNPL NEGTDAARAA IAFSFFSIFT WAG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 54.236572
Match: PF01284.14
Description: No description for PF01284.14 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [164-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QAVLAFQRYQ IGADSALFSQ DYMDPSQDSS MPYAPYVEPS AGSDPAGMGG TYQHPANAFD  60
   61 AEPQGYQSQG Y

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle