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View Structure Prediction Details

Protein: pst-2
Organism: Caenorhabditis elegans
Length: 247 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pst-2.

Description E-value Query
Range
Subject
Range
gi|69150293, gi|... - gi|69938720|ref|ZP_00633133.1| Protein of unknown function DUF6 [Paracoccus denitrificans PD1222], g...
127.0 [0..3] [220..356]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSNASVGY LNYPTQVIFK CCKLIPVLIG GILIQGKRYG WIDIGAAMLM SLGIIMFTLA  60
   61 DNKVSPNFDS RGYIMICGAL LADAVIGNIQ EKNMKKYGGS SNEMVLYSYG IGSVFIFAFV 120
  121 VLSGEVFSAI PFFLENSWKT FGYALILSCL GYLGV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 10.318759
Match: PF08449.2
Description: No description for PF08449.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVVLTHIKVF GALVAVTVTT LRKALTIILS FMLFSKPFTI EYVYAGSVVM LAIYLNLYSK  60
   61 NKTSWDNMIR RFVARAMGYH DVSVARKDPM TV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.93
Match: 2i68A
Description: No description for 2i68A was found.

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