YRC Public Data Repository - Protein Structure Prediction

Protein:	DCAKD_MOUSE
Organism:	Mus musculus
Length:	231 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DCAKD_MOUSE.

Description	E-value	Query Range	Subject Range
DCAKD_RAT - Dephospho-CoA kinase domain-containing protein OS=Rattus norvegicus GN=Dcakd PE=2 SV=1	237.0	[0..1]	[231..1]
DCAKD_BOVIN - Dephospho-CoA kinase domain-containing protein OS=Bos taurus GN=DCAKD PE=2 SV=2	225.0	[0..1]	[231..1]
gi\|109116287, gi... - gi\|109116287\|ref\|XP_001115122.1\| PREDICTED: similar to dephospho-CoA kinase domain containing isofor...	223.0	[0..1]	[218..1]
gi\|114666727, gi... - gi\|114666729\|ref\|XP_001144080.1\| PREDICTED: dephospho-CoA kinase domain containing isoform 2 [Pan tr...	222.0	[0..1]	[218..1]
DCAKD - dephospho-CoA kinase domain containing	222.0	[0..1]	[218..1]
gi\|20151879 - gi\|20151879\|gb\|AAM11299.1\| RH63365p [Drosophila melanogaster]	221.0	[0..1]	[231..1]
COAE_ARATH - Dephospho-CoA kinase OS=Arabidopsis thaliana GN=COAE PE=2 SV=1	217.0	[0..1]	[223..1]
gi\|47214587 - gi\|47214587\|emb\|CAG00941.1\| unnamed protein product [Tetraodon nigroviridis]	217.0	[0..1]	[228..1]

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Predicted Domain #1

Region A:
Residues: [1-231]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLVGLTGGI ASGKSSVIQV FQQLGCAVID VDVIARHVVQ PGYPAHRRIV EAFGTEVLLE  60
   61 NGDIDRKVLG DLIFNQPDRR QLLNSITHPE IRKEMMKETF KYFLRGYRYV ILDIPLLFET 120
  121 KKLLKYMKHT VVVYCDRDTQ LARLMKRNNL NREDAEARIN AQLPLKDKAR MANHVLDNSG 180
  181 EWSLTRRQAI LLHAKLERSM EYLPLRLGFL TGLAGIASLL YLLTRYLLPS P

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	49.522879
Match:	1jjvA
Description:	Dephospho-CoA kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.00104173493322	bayes_pls_golite062009
dephospho-CoA kinase activity	0.656417599253142	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: