| Protein: | COG8 |
| Organism: | Homo sapiens |
| Length: | 612 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COG8.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..612] | [1..612] |
|
|
0.0 | [18..608] | [24..614] |
|
|
0.0 | [17..611] | [23..625] |
|
|
0.0 | [1..607] | [1..600] |
|
|
0.0 | [1..612] | [1..616] |
|
|
0.0 | [127..612] | [2..487] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MATAATIPSV ATATAAALGE VEDEGLLASL FRDRFPEAQW RERPDVGRYL RELSGSGLER 60
61 LRREPERLAE ERAQLLQQTR DLAFANYKTF IRGAECTERI HRLFGDVEAS LGRLLDRLPS 120
121 FQQSCRNFVK EAEEISSNRR
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.791 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.760 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.754 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.704 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.634 | N/A | N/A | a.7.1 | Spectrin repeat |
|
Region A: Residues: [141-402] |
1 11 21 31 41 51
| | | | | |
1 MNSLTLNRHT EILEILEIPQ LMDTCVRNSY YEEALELAAY VRRLERKYSS IPVIQGIVNE 60
61 VRQSMQLMLS QLIQQLRTNI QLPACLRVIG YLRRMDVFTE AELRVKFLQA RDAWLRSILT 120
121 AIPNDDPYFH ITKTIEASRV HLFDIITQYR AIFSDEDPLL PPAMGEHTVN ESAIFHGWVL 180
181 QKVSQFLQVL ETDLYRGIGG HLDSLLGQCM YFGLSFSRVG ADFRGQLAPV FQRVAISTFQ 240
241 KAIQETVEKF QEEMNSYMLI SA
|
| Detection Method: | |
| Confidence: | 2.37 |
| Match: | 2d2sA |
| Description: | Crystal Structure of the Exo84p C-terminal Domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [403-612] |
1 11 21 31 41 51
| | | | | |
1 PAILGTSNMP AAVPATQPGT LQPPMVLLDF PPLACFLNNI LVAFNDLRLC CPVALAQDVT 60
61 GALEDALAKV TKIILAFHRA EEAAFSSGEQ ELFVQFCTVF LEDLVPYLNR CLQVLFPPAQ 120
121 IAQTLGIPPT QLSKYGNLGH VNIGAIQEPL AFILPKRETL FTLDDQALGP ELTAPAPEPP 180
181 AEEPRLEPAG PACPEGGRAE TQAEPPSVGP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
