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View Structure Prediction Details

Protein: MAK16_MOUSE
Organism: Mus musculus
Length: 296 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAK16_MOUSE.

Description E-value Query
Range
Subject
Range
gi|73979341 - gi|73979341|ref|XP_532811.2| PREDICTED: similar to RNA binding motif protein 13 [Canis familiaris]
438.0 [0..6] [295..122]
gi|114619633 - gi|114619633|ref|XP_528106.2| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
435.0 [0..6] [296..48]
MAK16_BOVIN - Protein MAK16 homolog OS=Bos taurus GN=MAK16 PE=2 SV=1
432.0 [0..1] [296..1]
gi|12853682 - gi|12853682|dbj|BAB29815.1| unnamed protein product [Mus musculus]
431.0 [0..1] [296..1]
gi|46255742, gi|... - gi|46255742|gb|AAH28230.1| MAK16 homolog (S. cerevisiae) [Homo sapiens], gi|13625186|gb|AAK34952.1|A...
429.0 [0..1] [296..1]
MK16A_XENLA - Protein MAK16 homolog A OS=Xenopus laevis GN=mak16-a PE=2 SV=1
426.0 [0..1] [296..1]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSDDVIWNT LGNKQFCSFK IRTKTQGFCR NEYSLTGLCN RSSCPLANSQ YATIKEEKGQ  60
   61 CYLYMKVIER AAFPRRLWER VRLSKNYEKA LEQIDENLIY WPRFIRHKCK QRFTKITQYL 120
  121 IRIRKLTLKR QRKLVPLSKK VERREKRREE KALIAAQLDN AIEKELLERL KQDTYGDIYN 180
  181 FPI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [184-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HAFDKALEKQ EAESDSEDEE EEEDEDEEED VGKREFVEDE EVEESDLSDF EDMDKLNTDS  60
   61 EEDQDDESSN DEEAHKAKHK GKAPLKGPLR KKRAYVEIEY EQETEPMAKV KAT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle